RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 H3BUA1 57 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CYB5BO43169 146 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 JTBO76095 146 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 DUS4LO95620 317 aaKnown RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CRYGCP07315 174 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 P0C879 139 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SULT1A3P0DMM9 295 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SULT1A4P0DMN0 295 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 HIST1H1BP16401 226 aaKnown RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CTRB1P17538 263 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SNCAP37840 140 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SPCS3P61009 180 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 RHOGP84095 191 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PRCDQ00LT1 54 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 DEFA5Q01523 94 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 WT1-ASQ06250 92 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 KIAA0141Q14154 515 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SMCO1Q147U7 214 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CTRB2Q6GPI1 263 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 C19orf35Q6ZS72 473 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 HSD17B13Q7Z5P4 300 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 C12orf45Q8N5I9 185 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 LRTM2Q8N967 370 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 DUSP18Q8NEJ0 188 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR11H1Q8NG94 326 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR1N2Q8NGR9 330 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR52E5Q8NH55 327 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ZNF431Q8TF32 576 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SAT2Q96F10 170 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 USMG5Q96IX5 58 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 DUX3Q96PT4 197 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SRSF8Q9BRL6 282 aaKnown RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TM2D2Q9BX73 214 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 GNB4Q9HAV0 340 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 GPN1Q9HCN4 374 aaPredicted RBP4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 THYN1Q9P016 225 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TMED3Q9Y3Q3 217 aa4.49□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IGHV3-21A0A0B4J1V1 117 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 A0A1B0GU03 582 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IGLC7A0M8Q6 106 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 C5orf51A6NDU8 294 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FAM25EA8MYX2 175 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CCL24O00175 119 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 UBE2CO00762 179 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 ADAP1O75689 374 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 NDUFB8O95169 186 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 BRI3O95415 125 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IGHV3-23P01764 117 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IL5P05113 134 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SPNP16150 400 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MYCNOSP40205 109 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 HOXA1P49639 335 aaPredicted RBP4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 DEFB136Q30KP8 78 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 C15orf32Q32M92 178 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 NECAP1Q8NC96 275 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MITD1Q8WV92 249 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 HIPK2Q9H2X6 1198 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 RBKSQ9H477 322 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 RANGRFQ9HD47 186 aaPredicted RBP4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 GSKIPQ9P0R6 139 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 FBXL17Q9UF56 701 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 S4R3C0 116 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PKD1L1Q8TDX9 2849 aa4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
SCARNA6.1-201ENST00000516989 IGLV11-55A0A075B6I3 123 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TRBV9A0A0B4J1U6 114 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CBY3A6NI87 242 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 I3L521 148 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PITX3O75364 302 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MED6O75586 246 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 HSPB1P04792 205 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 LGALS1P09382 135 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 SLC25A6P12236 298 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 TNFRSF9Q07011 255 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR1L6Q8NGR2 347 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR1P1Q8NH06 330 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MYOZ3Q8TDC0 251 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PINX1Q96BK5 328 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 OR10C1Q96KK4 312 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 P2RX4Q99571 388 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MARVELD1Q9BSK0 173 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PALMDQ9NP74 551 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PEF1Q9UBV8 284 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 CACFD1Q9UGQ2 172 aa4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 PAIP2BQ9ULR5 123 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 F11RQ9Y624 299 aaKnown RBP4.47□□□□□ -1.69
SCARNA6.1-201ENST00000516989 WNK1Q9H4A3 2382 aa4.46□□□□□ -1.7
SCARNA6.1-201ENST00000516989 IGHV4OR15-8A0A075B7B6 117 aa4.46□□□□□ -1.7
SCARNA6.1-201ENST00000516989 A0A087WW49 117 aa4.46□□□□□ -1.7
SCARNA6.1-201ENST00000516989 MFSD2BA6NFX1 497 aa4.46□□□□□ -1.7
SCARNA6.1-201ENST00000516989 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
SCARNA6.1-201ENST00000516989 MPTX1A8MV57 137 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms