RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ATP6V0BQ99437 205 aa7.05□□□□□ -1.28
DDX41-209ENST00000508279 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
DDX41-209ENST00000508279 UBQLN2Q9UHD9 624 aa7.05□□□□□ -1.28
DDX41-209ENST00000508279 TRAV14DV4A0A0A6YYC5 116 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 A0A0B4J2A0 478 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 IGHV3-66A0A0C4DH42 116 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 C15orf62A8K5M9 175 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 A8MZ25 164 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 INS-IGF2F8WCM5 200 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 TMEM50AO95807 157 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 IFNA10P01566 189 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 HTR2BP41595 481 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 TFPI2P48307 235 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 SRPXP78539 464 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 SMCO1Q147U7 214 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 ANKRD55Q3KP44 614 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 TMEM128Q5BJH2 165 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 CENPSQ8N2Z9 138 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 TMEM116Q8NCL8 245 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 SLC24A4Q8NFF2 622 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 OR52E5Q8NH55 327 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 SLC25A21Q9BQT8 299 aaPredicted RBP7.04□□□□□ -1.28
DDX41-209ENST00000508279 RHPN1-AS1Q9BWJ2 59 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 RBKSQ9H477 322 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 FNDC4Q9H6D8 234 aaPredicted RBP7.04□□□□□ -1.28
DDX41-209ENST00000508279 RETNQ9HD89 108 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 MRPL36Q9P0J6 103 aaKnown RBP7.04□□□□□ -1.28
DDX41-209ENST00000508279 SHPKQ9UHJ6 478 aa7.04□□□□□ -1.28
DDX41-209ENST00000508279 PAIP2BQ9ULR5 123 aaKnown RBP7.04□□□□□ -1.28
DDX41-209ENST00000508279 PUS1Q9Y606 427 aaKnown RBP eCLIP7.04□□□□□ -1.28
DDX41-209ENST00000508279 TRAV25A0A0B4J276 109 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 RPS10-NUDT3A0A1W2PQS6 291 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 RBMY1BA6NDE4 496 aaKnown RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 RBMY1EA6NEQ0 496 aaKnown RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 K7EMT4 169 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 SCGB2A1O75556 95 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 HOXB5P09067 269 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 RBMY1DP0C7P1 496 aaKnown RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 NPY1RP25929 384 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 FCGR2BP31994 310 aaPredicted RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 RPL11P62913 178 aaKnown RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 PPP1R1AQ13522 171 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 RBMS2Q15434 407 aaKnown RBP7.03□□□□□ -1.28
DDX41-209ENST00000508279 TIGITQ495A1 244 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 NMSQ5H8A3 153 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 TOMM20LQ6UXN7 152 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 ZNF600Q6ZNG1 722 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 WFDC3Q8IUB2 231 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 DTD1Q8TEA8 209 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 RNF2Q99496 336 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 SPATA25Q9BR10 227 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 TM2D3Q9BRN9 247 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 GINS3Q9BRX5 216 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 NDUFA13Q9P0J0 144 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 SMPXQ9UHP9 88 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 FLVCR2Q9UPI3 526 aa7.03□□□□□ -1.28
DDX41-209ENST00000508279 NAP1L6A6NFF2 107 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 CENPXA8MT69 81 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 CHEK1O14757 476 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 TSPAN4O14817 238 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 CLN5O75503 358 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 SFT2D2O95562 160 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 IFNA4P05014 189 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 IAPPP10997 89 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 RND2P52198 227 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 C2orf83Q53S99 150 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 OR4X1Q8NH49 305 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 DEDD2Q8WXF8 326 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 ST8SIA2Q92186 375 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 ACY3Q96HD9 319 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 ZNF414Q96IQ9 312 aa7.02□□□□□ -1.29
DDX41-209ENST00000508279 SDHCQ99643 169 aaPredicted RBP7.02□□□□□ -1.29
DDX41-209ENST00000508279 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
DDX41-209ENST00000508279 PIGBOS1A0A0B4J2F0 54 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 A0A1B0GU03 582 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 OR4C46A6NHA9 309 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 DNASE2O00115 360 aaPredicted RBP7.01□□□□□ -1.29
DDX41-209ENST00000508279 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
DDX41-209ENST00000508279 IL7P13232 177 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 OR10J1P30954 320 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 BMI1P35226 326 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 BSXQ3C1V8 233 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 AARDQ4LEZ3 155 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 PVRIGQ6DKI7 326 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 ETFRF1Q6IPR1 90 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 TCF24Q7RTU0 167 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 NOXA1Q86UR1 476 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 RNASEH2CQ8TDP1 164 aaKnown RBP7.01□□□□□ -1.29
DDX41-209ENST00000508279 OR10C1Q96KK4 312 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 MAGT1Q9H0U3 335 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 HSPB7Q9UBY9 170 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 CACFD1Q9UGQ2 172 aa7.01□□□□□ -1.29
DDX41-209ENST00000508279 TENM3Q9P273 2699 aa7□□□□□ -1.29
DDX41-209ENST00000508279 TRAV30A0A087WSZ9 112 aa7□□□□□ -1.29
DDX41-209ENST00000508279 LOC102724200A0A096LPH7 203 aaPredicted RBP7□□□□□ -1.29
DDX41-209ENST00000508279 DUXBA0A1W2PPF3 345 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms