RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PSMB11A5LHX3 300 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 TMEM262E9PQX1 116 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 RNASE7Q9H1E1 156 aaKnown RBP13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 TFF1P04155 84 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 MRAP2Q96G30 205 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 WFDC1Q9HC57 220 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 SRRM5B3KS81 715 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 LDLRAD4O15165 306 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 SRSF3P84103 164 aaKnown RBP13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 C21orf62-AS1Q17RA5 79 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 C14orf144Q96I85 54 aa13.73□□□□□ -0.21
PCDHA1-203ENST00000504120 GNG5P63218 68 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 EFNB3Q15768 340 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 PRDM13Q9H4Q3 707 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 NPFFR1Q9GZQ6 430 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 PLXNA3P51805 1871 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 CLPSP04118 112 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 CYB5R2Q6BCY4 276 aa13.72□□□□□ -0.21
PCDHA1-203ENST00000504120 H3BRM9 83 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 IL18BPO95998 194 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 DNAL4O96015 105 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 ZCCHC24Q8N2G6 241 aaKnown RBP13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 RPUSD1Q9UJJ7 312 aaKnown RBP13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 RNASE1P07998 156 aaKnown RBP13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 PLAURQ03405 335 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 ZNF257Q9Y2Q1 563 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
PCDHA1-203ENST00000504120 MGAMO43451 1857 aa13.71□□□□□ -0.22
PCDHA1-203ENST00000504120 A0A1B0GV90 55 aa13.71□□□□□ -0.22
PCDHA1-203ENST00000504120 SERF1AO75920 110 aa13.71□□□□□ -0.22
PCDHA1-203ENST00000504120 FAM19A2Q8N3H0 131 aa13.71□□□□□ -0.22
PCDHA1-203ENST00000504120 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 ABCA7Q8IZY2 2146 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 NAPSAO96009 420 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 PYYP10082 97 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 FOXF2Q12947 444 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 TMEM190Q8WZ59 177 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 GSN-AS1Q9NRJ2 163 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 BEX4Q9NWD9 120 aaPredicted RBP13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 MRPL16Q9NX20 251 aaKnown RBP13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 WDR81Q562E7 1941 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 RHOGP84095 191 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 LINC01587Q99440 93 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 IGKV1-27A0A075B6S5 117 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 TIMM23O14925 209 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 OR13C6PQ8NH95 151 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 NRN1Q9NPD7 142 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 ZDBF2Q9HCK1 2354 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 FAM71F2Q6NXP2 309 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 PSG8Q9UQ74 426 aa13.7□□□□□ -0.22
PCDHA1-203ENST00000504120 LEPP41159 167 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 TMEM50AO95807 157 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 ADMP35318 185 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 PRSS22Q9GZN4 317 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 SPACA3Q8IXA5 215 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 C8orf46Q8TAG6 207 aa13.69□□□□□ -0.22
PCDHA1-203ENST00000504120 FNDC1Q4ZHG4 1894 aaPredicted RBP13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 LYNX1G3V0Z9 82 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 LYNX1P0DP58 116 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 OCC1Q8TAD7 63 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 PNRC2Q9NPJ4 139 aaKnown RBP13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 SUPT4H1P63272 117 aaKnown RBP13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 PRB3Q04118 309 aaPredicted RBP13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 TREML4Q6UXN2 200 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 OR10J3Q5JRS4 329 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 DUSP14O95147 198 aaKnown RBP13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 HEPN1Q6WQI6 88 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 GNB1LQ9BYB4 327 aa13.68□□□□□ -0.22
PCDHA1-203ENST00000504120 LOC105371267A0A1B0GV96 52 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 PPBPP02775 128 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 ZNF418Q8TF45 676 aaPredicted RBP13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 TMEM242Q9NWH2 141 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 CD5P06127 495 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 CD24P25063 80 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 TEX38Q6PEX7 206 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 VDAC2P45880 294 aaPredicted RBP13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 TMEM167AQ8TBQ9 72 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 TRAV1-1A0A0B4J248 108 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 CACNG7P62955 275 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 JKAMPQ9P055 326 aa13.67□□□□□ -0.22
PCDHA1-203ENST00000504120 TTC32Q5I0X7 151 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 VSIRQ9H7M9 311 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 SSBP4Q9BWG4 385 aaPredicted RBP13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 SNAI2O43623 268 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 STAG3L3P0CL85 134 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 TMEM42Q69YG0 159 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 ST20Q9HBF5 79 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 CD7P09564 240 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 TSKUQ8WUA8 353 aa13.66□□□□□ -0.22
PCDHA1-203ENST00000504120 PSPNO60542 156 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 ARTNQ5T4W7 220 aa13.65□□□□□ -0.22
PCDHA1-203ENST00000504120 GGTLC1Q9BX51 225 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms