RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 RRHO14718 337 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 BRS3P32247 399 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 PRRX1P54821 245 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 RAB11AP62491 216 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 CCL20P78556 96 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 PRCDQ00LT1 54 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 TPTE2P1Q5T6R2 138 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 SLC24A4Q8NFF2 622 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 OR4A5Q8NH83 315 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 SFT2D1Q8WV19 159 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 TMEM170AQ8WVE7 144 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 NKX6-2Q9C056 277 aaPredicted RBP13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 SMDT1Q9H4I9 107 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 VSIRQ9H7M9 311 aa13.46□□□□□ -0.26
AP004609.1-201ENST00000498872 MC5RP33032 325 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 DLK1P80370 383 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 BTN1A1Q13410 526 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 OR5B3Q8NH48 314 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 MBD3L1Q8WWY6 194 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 NPCDR1Q9BY65 106 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 PLEKHA3Q9HB20 300 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 WDR83OSQ9Y284 106 aa13.45□□□□□ -0.26
AP004609.1-201ENST00000498872 MYOD1P15172 320 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 NPY1RP25929 384 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 CD1BP29016 333 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 CEACAM3P40198 252 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 PPT1P50897 306 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 ELLP55199 621 aaPredicted RBP13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 C9orf152Q5JTZ5 239 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 C10orf99Q6UWK7 81 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 OR4F17Q8NGA8 305 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 VSTM2AQ8TAG5 236 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 OR4F4Q96R69 305 aa13.44□□□□□ -0.26
AP004609.1-201ENST00000498872 TEX50A0A1B0GTY4 177 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 MBP02144 154 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 AMY1AP04745 511 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 ZNF726P1Q15940 193 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 ACSM6Q6P461 480 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 C16orf82Q7Z2V1 217 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 RCC1LQ96I51 464 aaKnown RBP13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 RBM14Q96PK6 669 aaKnown RBP13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 AMMECR1Q9Y4X0 333 aaPredicted RBP13.43□□□□□ -0.26
AP004609.1-201ENST00000498872 RBFOX3A6NFN3 312 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 MPDU1O75352 247 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 SNAPINO95295 136 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 IFNA4P05014 189 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 TCTEX1D4Q5JR98 221 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 HINT2Q9BX68 163 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 TMA7Q9Y2S6 64 aaKnown RBP13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 NOTCH3Q9UM47 2321 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 CA2P00918 260 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 RPL8P62917 257 aaKnown RBP13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 RPEQ96AT9 228 aa13.42□□□□□ -0.26
AP004609.1-201ENST00000498872 SOX15O60248 233 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 IGKV1D-33P01593 117 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 IGKV1-33P01594 117 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 VMA21Q3ZAQ7 101 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 ZNF506Q5JVG8 444 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 SSX7Q7RTT5 188 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 RARRES2Q99969 163 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 SLC35B3Q9H1N7 401 aa13.41□□□□□ -0.26
AP004609.1-201ENST00000498872 TCRBV4S1A1TA0A5B7 111 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 SMCO3A2RU48 225 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 DNASE2O00115 360 aaPredicted RBP13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 LGALS7P47929 136 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 HNF4GQ14541 408 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 KHDC1LQ5JSQ8 128 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 CCDC144NLQ6NUI1 221 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 OR1L8Q8NGR8 309 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 COMMD5Q9GZQ3 224 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
AP004609.1-201ENST00000498872 IGHV1-3A0A0C4DH29 117 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 PF4V1P10720 104 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 IGLL1P15814 213 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 HES1Q14469 280 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 ICAM4Q14773 271 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 HAGHQ16775 308 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 RPP25LQ8N5L8 163 aaKnown RBP13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 OR10G4Q8NGN3 311 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 OR10G9Q8NGN4 311 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 OR10G7Q8NGN6 311 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 CTXND1A0A1B0GTU2 59 aa13.39□□□□□ -0.27
AP004609.1-201ENST00000498872 LOC102723971A0A1B0GUV8 181 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms