RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 C14orf166Q9Y224 244 aaKnown RBP9.35□□□□□ -0.91
HSPG2-212ENST00000493940 TMEM56-RWDD3S4R434 201 aa9.35□□□□□ -0.91
HSPG2-212ENST00000493940 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 NUPL2O15504 423 aaKnown RBP9.34□□□□□ -0.91
HSPG2-212ENST00000493940 YIF1AO95070 293 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 EWSR1Q01844 656 aaKnown RBP eCLIP9.34□□□□□ -0.91
HSPG2-212ENST00000493940 LYZL2Q7Z4W2 148 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 APRG1Q8IVJ8 170 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 RRNAD1Q96FB5 475 aaKnown RBP9.34□□□□□ -0.91
HSPG2-212ENST00000493940 SPAG8Q99932 426 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-212ENST00000493940 CACNG5Q9UF02 275 aa9.34□□□□□ -0.91
HSPG2-212ENST00000493940 RSL24D1Q9UHA3 163 aaKnown RBP9.34□□□□□ -0.91
HSPG2-212ENST00000493940 GNG7O60262 68 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 IGKV1-17P01599 117 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 AKR1C4P17516 323 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 SNCAP37840 140 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 TFPI2P48307 235 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 HOXA1P49639 335 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-212ENST00000493940 SPCS3P61009 180 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 DHODHQ02127 395 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 CCDC190Q86UF4 302 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 GBGT1Q8N5D6 347 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 TMEM116Q8NCL8 245 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 GALNT14Q96FL9 552 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 PRRT1Q99946 306 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-212ENST00000493940 PUS1Q9Y606 427 aaKnown RBP eCLIP9.33□□□□□ -0.92
HSPG2-212ENST00000493940 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
HSPG2-212ENST00000493940 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-212ENST00000493940 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 B3GALNT1O75752 331 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-212ENST00000493940 TIGITQ495A1 244 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 NMSQ5H8A3 153 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 DUSP18Q8NEJ0 188 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 OR52E5Q8NH55 327 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
HSPG2-212ENST00000493940 GGTLC1Q9BX51 225 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 VSIRQ9H7M9 311 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 MCUBQ9NWR8 336 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 RABL2AQ9UBK7 228 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-212ENST00000493940 RABL2BQ9UNT1 228 aa9.32□□□□□ -0.92
HSPG2-212ENST00000493940 CLN5O75503 358 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 DFFBO76075 338 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 ATG12O94817 140 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
HSPG2-212ENST00000493940 ANKRD55Q3KP44 614 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 PYDC2Q56P42 97 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 FAM219AQ8IW50 185 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 OR4X1Q8NH49 305 aa9.31□□□□□ -0.92
HSPG2-212ENST00000493940 CCDC160A6NGH7 325 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 NOL3O60936 208 aaKnown RBP9.3□□□□□ -0.92
HSPG2-212ENST00000493940 OPRK1P41145 380 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 NPBWR1P48145 328 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 RBMS2Q15434 407 aaKnown RBP9.3□□□□□ -0.92
HSPG2-212ENST00000493940 C2orf83Q53S99 150 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 LAMTOR1Q6IAA8 161 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 ZNF600Q6ZNG1 722 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 TCF24Q7RTU0 167 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 SDHCQ99643 169 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-212ENST00000493940 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 HEYLQ9NQ87 328 aaPredicted RBP9.3□□□□□ -0.92
HSPG2-212ENST00000493940 SCP2D1Q9UJQ7 156 aa9.3□□□□□ -0.92
HSPG2-212ENST00000493940 IGLC1P0CG04 106 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 HTR2BP41595 481 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 SUB1P53999 127 aaKnown RBP eCLIP9.29□□□□□ -0.928e-6■■■□□ 15.4
HSPG2-212ENST00000493940 BAK1Q16611 211 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 DEFB135Q30KP9 77 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 IL22RA2Q969J5 263 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 RBKSQ9H477 322 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 MAP6D1Q9H9H5 199 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 ENY2Q9NPA8 101 aa9.29□□□□□ -0.92
HSPG2-212ENST00000493940 A0A0B4J2A0 478 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 CEBPZOSA8MTT3 80 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 PITX3O75364 302 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 SULT1A3P0DMM9 295 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 SULT1A4P0DMN0 295 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 CRYBB3P26998 211 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 RND2P52198 227 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 TNFRSF9Q07011 255 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 GSG1LQ6UXU4 331 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 TMED4Q7Z7H5 227 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 SRRQ9GZT4 340 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 MS4A6AQ9H2W1 248 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 HSPB7Q9UBY9 170 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 SHPKQ9UHJ6 478 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 KCNIP3Q9Y2W7 256 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 U3KQE9 123 aa9.28□□□□□ -0.92
HSPG2-212ENST00000493940 CORTO00230 105 aa9.27□□□□□ -0.93
HSPG2-212ENST00000493940 CCR6P51684 374 aa9.27□□□□□ -0.93
HSPG2-212ENST00000493940 SMCO1Q147U7 214 aa9.27□□□□□ -0.93
HSPG2-212ENST00000493940 SLC24A4Q8NFF2 622 aa9.27□□□□□ -0.93
HSPG2-212ENST00000493940 NPIPB3Q92617 1050 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms