RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TAS2R46P59540 309 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 NUTF2P61970 127 aaKnown RBP12.67□□□□□ -0.38
NUP50-218ENST00000493456 Q6ZRM9 215 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 NRG4Q8WWG1 115 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 FAM210BQ96KR6 192 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 SCRT1Q9BWW7 348 aa12.67□□□□□ -0.38
NUP50-218ENST00000493456 CORTO00230 105 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 PSMB9P28065 219 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 SNCAP37840 140 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 MXD1Q05195 221 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 IDNKQ5T6J7 187 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 OR5H2Q8NGV7 314 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 ANAPC10Q9UM13 185 aa12.66□□□□□ -0.38
NUP50-218ENST00000493456 IGLV2-18A0A075B6J9 118 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 PMP2P02689 132 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
NUP50-218ENST00000493456 HERC1Q15751 4861 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 HELTA6NFD8 242 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 INS-IGF2F8WCM5 200 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 TMEM127O75204 238 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 HSPA13P48723 471 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 RNF212Q495C1 297 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 PHLDA2Q53GA4 152 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 PSMG4Q5JS54 123 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 FCGR1BQ92637 280 aa12.64□□□□□ -0.39
NUP50-218ENST00000493456 APOBP04114 4563 aaKnown RBP12.63□□□□□ -0.39
NUP50-218ENST00000493456 CLN5O75503 358 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 CDK2AP2O75956 126 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 IGKV1-39P01597 117 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 IGKV1D-39P04432 117 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 NAT1P18440 290 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
NUP50-218ENST00000493456 SUB1P53999 127 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUP50-218ENST00000493456 DHRS2Q13268 280 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 C1orf134Q5TEV5 83 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 TBC1D26Q86UD7 250 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 MRGPRFQ96AM1 343 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 NEU1Q99519 415 aa12.63□□□□□ -0.39
NUP50-218ENST00000493456 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 PPP5CP53041 499 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 SNRPD3P62318 126 aaKnown RBP12.62□□□□□ -0.39
NUP50-218ENST00000493456 SLC35G3Q8N808 338 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 OR4X1Q8NH49 305 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 SEPSECSQ9HD40 501 aaKnown RBP12.62□□□□□ -0.39
NUP50-218ENST00000493456 XCL2Q9UBD3 114 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
NUP50-218ENST00000493456 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
NUP50-218ENST00000493456 SPINK9Q5DT21 86 aa12.61□□□□□ -0.39
NUP50-218ENST00000493456 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
NUP50-218ENST00000493456 S100A16Q96FQ6 103 aaKnown RBP12.61□□□□□ -0.39
NUP50-218ENST00000493456 TRAV30A0A087WSZ9 112 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 H3BMM0 161 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 HRH1P35367 487 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 OPRK1P41145 380 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 SPARTQ8N0X7 666 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 U3KQE9 123 aa12.6□□□□□ -0.39
NUP50-218ENST00000493456 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 C16orf90A8MZG2 172 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 IGKV1-17P01599 117 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 HNRNPCP07910 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUP50-218ENST00000493456 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 RNASE2P10153 161 aaKnown RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 RPL5P46777 297 aaKnown RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 TSPAN5P62079 268 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 C16orf54Q6UWD8 224 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 MAPKAPK5-AS1Q8N8E1 139 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 PDCD10Q9BUL8 212 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 RNF167Q9H6Y7 350 aa12.59□□□□□ -0.39
NUP50-218ENST00000493456 MRPL36Q9P0J6 103 aaKnown RBP12.59□□□□□ -0.39
NUP50-218ENST00000493456 FAM90A26D6RGX4 464 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 EMP1P54849 157 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 TAS2R20P59543 309 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 UBE2NLQ5JXB2 153 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 IZUMO2Q6UXV1 221 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 NRN1Q9NPD7 142 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 DKK2Q9UBU2 259 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 RFNGQ9Y644 331 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
NUP50-218ENST00000493456 LOC100506127A0A0U1RQW1 187 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 HLA-DMAP28067 261 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
NUP50-218ENST00000493456 UCP3P55916 312 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
NUP50-218ENST00000493456 OXA1LQ15070 435 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
NUP50-218ENST00000493456 TIGITQ495A1 244 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms