RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TMEM230Q96A57 120 aa13.39□□□□□ -0.27
PTPRU-207ENST00000492954 FNDC4Q9H6D8 234 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-207ENST00000492954 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-207ENST00000492954 PRR13Q9NZ81 148 aa13.39□□□□□ -0.27
PTPRU-207ENST00000492954 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
PTPRU-207ENST00000492954 SACSQ9NZJ4 4579 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 CORTO00230 105 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 TMEM50AO95807 157 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 OPRK1P41145 380 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 MLANAQ16655 118 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 OVOL2Q9BRP0 275 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 GINS3Q9BRX5 216 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 MCUBQ9NWR8 336 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 SCP2D1Q9UJQ7 156 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTPRU-207ENST00000492954 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
PTPRU-207ENST00000492954 IGKV3-7A0A075B6H7 116 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 TFPI2P48307 235 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 TMEM187Q14656 261 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 ZNF600Q6ZNG1 722 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 OR52E5Q8NH55 327 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 ZFAND3Q9H8U3 227 aa13.37□□□□□ -0.27
PTPRU-207ENST00000492954 A0A1B0GU03 582 aa13.36□□□□□ -0.27
PTPRU-207ENST00000492954 NXPH3O95157 252 aa13.36□□□□□ -0.27
PTPRU-207ENST00000492954 APOHP02749 345 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-207ENST00000492954 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
PTPRU-207ENST00000492954 ST8SIA2Q92186 375 aa13.36□□□□□ -0.27
PTPRU-207ENST00000492954 GALNT14Q96FL9 552 aa13.36□□□□□ -0.27
PTPRU-207ENST00000492954 HEYLQ9NQ87 328 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-207ENST00000492954 IGHV3-66A0A0C4DH42 116 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 LCE6AA0A183 80 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 CCDC160A6NGH7 325 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 CLN5O75503 358 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 AKR1C4P17516 323 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
PTPRU-207ENST00000492954 HTR2BP41595 481 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 APOC4P55056 127 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 TCF24Q7RTU0 167 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 APRG1Q8IVJ8 170 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 GBGT1Q8N5D6 347 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 IL22RA2Q969J5 263 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 TRIM63Q969Q1 353 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 SCGB3A2Q96PL1 93 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
PTPRU-207ENST00000492954 SULT1A3P0DMM9 295 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 SULT1A4P0DMN0 295 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 BMI1P35226 326 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 SUPT4H1P63272 117 aaKnown RBP13.34□□□□□ -0.27
PTPRU-207ENST00000492954 KLF9Q13886 244 aaPredicted RBP13.34□□□□□ -0.27
PTPRU-207ENST00000492954 ZNF124Q15973 351 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 PYDC2Q56P42 97 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 LILRB2Q8N423 598 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 VSIRQ9H7M9 311 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 V9GYH0 126 aa13.34□□□□□ -0.27
PTPRU-207ENST00000492954 IGKV1-17P01599 117 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 DEFB135Q30KP9 77 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 TIGITQ495A1 244 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 C2orf83Q53S99 150 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 SLC24A4Q8NFF2 622 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 IL17DQ8TAD2 202 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 TMEM170AQ8WVE7 144 aa13.33□□□□□ -0.28
PTPRU-207ENST00000492954 KIR2DL5BA0A0G2JN68 375 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 KIR2DL5BA0A0G2JPC4 375 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 DFFBO76075 338 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 FAUP35544 74 aaKnown RBP13.32□□□□□ -0.28
PTPRU-207ENST00000492954 ZNF79Q15937 498 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 NMSQ5H8A3 153 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 Q6ZWC4 215 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 LYZL2Q7Z4W2 148 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 WFDC3Q8IUB2 231 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 KIR2DL5AQ8N109 375 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 KIR2DL5BQ8NHK3 375 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 RBM38Q9H0Z9 239 aaKnown RBP13.32□□□□□ -0.28
PTPRU-207ENST00000492954 MAP6D1Q9H9H5 199 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 TP53TG1Q9Y2A0 90 aa13.32□□□□□ -0.28
PTPRU-207ENST00000492954 RYR2Q92736 4967 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 UBE2CO00762 179 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 SPRY2O43597 315 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 SCGB2A1O75556 95 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 CD5P06127 495 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 NPY1RP25929 384 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 CCR6P51684 374 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 RND2P52198 227 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 PRSS54Q6PEW0 395 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 TOMM5Q8N4H5 51 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 RNASEH2CQ8TDP1 164 aaKnown RBP13.31□□□□□ -0.28
PTPRU-207ENST00000492954 LYSTQ99698 3801 aa13.31□□□□□ -0.28
PTPRU-207ENST00000492954 TRAV30A0A087WSZ9 112 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 A0A0B4J2A0 478 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 IGLC1P0CG04 106 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 ANXA3P12429 323 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 NPPCP23582 126 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 S100A5P33763 92 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 CMC4P56277 68 aaPredicted RBP13.3□□□□□ -0.28
PTPRU-207ENST00000492954 AP3S2P59780 193 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms