RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 CACNG8Q8WXS5 425 aa7.42□□□□□ -1.22
MCF2L-227ENST00000486806 TMEM158Q8WZ71 300 aa7.42□□□□□ -1.22
MCF2L-227ENST00000486806 BSCL2Q96G97 398 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-227ENST00000486806 CXorf58Q96LI9 332 aa7.42□□□□□ -1.22
MCF2L-227ENST00000486806 UBE2E2Q96LR5 201 aa7.42□□□□□ -1.22
MCF2L-227ENST00000486806 GGACTQ9BVM4 153 aa7.42□□□□□ -1.22
MCF2L-227ENST00000486806 SETD2Q9BYW2 2564 aaPredicted RBP7.42□□□□□ -1.22
MCF2L-227ENST00000486806 TRBV7-1A0A0A6YYK4 115 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 A0A0G2JLM5 398 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 S100A11P31949 105 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 CDX1P47902 265 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-227ENST00000486806 HBG1P69891 147 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 HBG2P69892 147 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ATP5G2Q06055 141 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 OR2F1Q13607 317 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 GAMTQ14353 236 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 MLANAQ16655 118 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ETFRF1Q6IPR1 90 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ZNF343Q6P1L6 599 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 INO80EQ8NBZ0 244 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-227ENST00000486806 TMEM116Q8NCL8 245 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 OR4X1Q8NH49 305 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 C4orf3Q8WVX3 66 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 EEF1AKMT3Q96AZ1 226 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 HYLS1Q96M11 299 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ATP6V0BQ99437 205 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 CITED1Q99966 193 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
MCF2L-227ENST00000486806 GNB4Q9HAV0 340 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 C21orf62Q9NYP8 219 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 S4R3C0 116 aa7.41□□□□□ -1.22
MCF2L-227ENST00000486806 ATRQ13535 2644 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.4□□□□□ -1.22
MCF2L-227ENST00000486806 I3L521 148 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 IGHV3-11P01762 117 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 IGHV3-48P01763 117 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 IGHV3-23P01764 117 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 LGALS1P09382 135 aaKnown RBP7.4□□□□□ -1.22
MCF2L-227ENST00000486806 CXCL2P19875 107 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 NUP62P37198 522 aaPredicted RBP7.4□□□□□ -1.22
MCF2L-227ENST00000486806 RND2P52198 227 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 RIPPLY3P57055 190 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 RUNX1Q01196 453 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 HIST2H2BDQ6DRA6 164 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 C18orf65Q6ZTR6 163 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 LILRB2Q8N423 598 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 KCNRGQ8N5I3 272 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 C11orf44Q8N8P7 122 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 OR1S2Q8NGQ3 325 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 SLC35E1Q96K37 410 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 TXN2Q99757 166 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 ATP5SQ99766 215 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 TMEM147Q9BVK8 224 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 MFFQ9GZY8 342 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 FBXL17Q9UF56 701 aa7.4□□□□□ -1.22
MCF2L-227ENST00000486806 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.22
MCF2L-227ENST00000486806 TSSC4Q9Y5U2 329 aaPredicted RBP7.4□□□□□ -1.22
MCF2L-227ENST00000486806 IGKV1D-37A0A075B6S9 117 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 IGKV1OR2-108A0A075B7D4 117 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 TCRBV4S1A1TA0A5B7 111 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 CLN5O75503 358 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 IGLC1P0CG04 106 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 GPR183P32249 361 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 EIF2B2P49770 351 aaKnown RBP7.39□□□□□ -1.23
MCF2L-227ENST00000486806 MFAP4P55083 255 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 CLINT1Q14677 625 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 ATP6V1FQ16864 119 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 ACSM6Q6P461 480 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 TREML4Q6UXN2 200 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 NDUFA11Q86Y39 141 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 C9orf62Q8N4C0 152 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 THAP8Q8NA92 274 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 NPIPB3Q92617 1050 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 ACY3Q96HD9 319 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 WFDC1Q9HC57 220 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 UQCC1Q9NVA1 299 aa7.39□□□□□ -1.23
MCF2L-227ENST00000486806 A0A0D9SG52 128 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 UBE2L5PA0A1B0GUS4 154 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 OR2T8A6NH00 312 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 BOLA2-SMG1P6H3BVE0 249 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 BMPR1BO00238 502 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 TGOLN2O43493 480 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 DFFBO76075 338 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 CTSGP08311 255 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 ADMP35318 185 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 NPBWR1P48145 328 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 NKX2-5P52952 324 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-227ENST00000486806 AP2S1P53680 142 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-227ENST00000486806 AKR1C1Q04828 323 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 LGALSLQ3ZCW2 172 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-227ENST00000486806 Q56UQ5 140 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 KHDC1LQ5JSQ8 128 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms