RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	SAMD13	Q5VXD3	122 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM14EP	Q6UXP3	125 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	IL34	Q6ZMJ4	242 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZNF600	Q6ZNG1	722 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	C12orf45	Q8N5I9	185 aa	Predicted RBP	3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR1S1	Q8NH92	325 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	C2orf50	Q96LR7	162 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	GINS3	Q9BRX5	216 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	HEYL	Q9NQ87	328 aa	Predicted RBP	3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZNF355P	Q9NSJ1	428 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	NSG2	Q9Y328	171 aa		3.89	□□□□□ -1.79
HDAC6-223	ENST00000480525	CEBPZOS	A8MTT3	80 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	GNG7	O60262	68 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM50A	O95807	157 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	MT-CO2	P00403	227 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	CLEC3B	P05452	202 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGLC1	P0CG04	106 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	PVALB	P20472	110 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	ADM	P35318	185 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	CMC4	P56277	68 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	SELENOT	P62341	195 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	DLK1	P80370	383 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	BAX	Q07812	192 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	OXA1L	Q15070	435 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	RGS21	Q2M5E4	152 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	IAH1	Q2TAA2	248 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	VWC2	Q2TAL6	325 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR8G2P	Q6IF36	304 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	LCN12	Q6JVE5	192 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	SLC25A24	Q6NUK1	477 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	PRSS54	Q6PEW0	395 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	GSG1L	Q6UXU4	331 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	S100A7A	Q86SG5	101 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	C11orf44	Q8N8P7	122 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	THAP8	Q8NA92	274 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR1S2	Q8NGQ3	325 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	CASTOR1	Q8WTX7	329 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM170A	Q8WVE7	144 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	DLX4	Q92988	240 aa	Predicted RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	PINX1	Q96BK5	328 aa	Known RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	MS4A10	Q96PG2	267 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	OR4C12	Q96R67	309 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	C11orf1	Q9H5F2	150 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	PFDN2	Q9UHV9	154 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	FLVCR2	Q9UPI3	526 aa		3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	RCL1	Q9Y2P8	373 aa	Known RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	STRAP	Q9Y3F4	350 aa	Known RBP	3.88	□□□□□ -1.79
HDAC6-223	ENST00000480525	TRAV6	A0A075B6T7	132 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525		A0A1W2PRX2	142 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525		A0A1W2PS18	150 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM213	A2RRL7	107 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	C2orf70	A6NJV1	201 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	PMS2P5	A8MQ11	134 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	SEC14L6	B5MCN3	397 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	WRB	O00258	174 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	MPDU1	O75352	247 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	DEDD	O75618	318 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	ADAP1	O75689	374 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	TOMM40	O96008	361 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	IFNA10	P01566	189 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGKV1-17	P01599	117 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	CSN3	P07498	182 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	HOXB5	P09067	269 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	LYL1	P12980	280 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	CBLN1	P23435	193 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	OPRK1	P41145	380 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	PLP1	P60201	277 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	ATP6V1F	Q16864	119 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	IZUMO4	Q1ZYL8	232 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	DEFB136	Q30KP8	78 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	C1orf194	Q5T5A4	169 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	C18orf65	Q6ZTR6	163 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM144	Q7Z5S9	345 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	RBMXL1	Q96E39	390 aa	Known RBP	3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	TRGV9	Q99603	122 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	SPAG8	Q99932	426 aa	Predicted RBP	3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	HINT2	Q9BX68	163 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	RBKS	Q9H477	322 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	TMEM231	Q9H6L2	316 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	VSIR	Q9H7M9	311 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	ZFAND3	Q9H8U3	227 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	LYRM2	Q9NU23	88 aa	Predicted RBP	3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525		U3KQE9	123 aa		3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	PRKDC	P78527	4128 aa	Known RBP	3.87	□□□□□ -1.79
HDAC6-223	ENST00000480525	MPTX1	A8MV57	137 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525		E5RGE8	158 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	TSPAN4	O14817	238 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	TRBV12-3	P01733	135 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	IGHV3-11	P01762	117 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	MBP	P02686	304 aa	Predicted RBP	3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	PRH1	P02810	166 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	RLN2	P04090	185 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	REG1A	P05451	166 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	APELA	P0DMC3	54 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	CRYBB3	P26998	211 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	S100A11	P31949	105 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	GPR183	P32249	361 aa		3.86	□□□□□ -1.79
HDAC6-223	ENST00000480525	P2RY1	P47900	373 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms