RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
USP11-207ENST00000478596 F11RQ9Y624 299 aaKnown RBP11.14□□□□□ -0.63
USP11-207ENST00000478596 IGHG4P01861 327 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 IFNA4P05014 189 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 ELANEP08246 267 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 CTRB1P17538 263 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 RAP2BP61225 183 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 RHOGP84095 191 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 THAP6Q8TBB0 222 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 PPP1R1CQ8WVI7 109 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 ASB13Q8WXK3 278 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 ZC4H2Q9NQZ6 224 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
USP11-207ENST00000478596 FAM223BA6NKX1 122 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 CORTO00230 105 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 SOX15O60248 233 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 OPRK1P41145 380 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 ID3Q02535 119 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 CFHR3Q02985 330 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 FGL1Q08830 312 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 C19orf54Q5BKX5 351 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 AKAP14Q86UN6 197 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 FAM223AQ8IWN6 122 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 OR1P1Q8NH06 330 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 U3KQ87 197 aa11.12□□□□□ -0.63
USP11-207ENST00000478596 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 IGHV3-21A0A0B4J1V1 117 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 RPS10-NUDT3A0A1W2PQS6 291 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 DEDDO75618 318 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
USP11-207ENST00000478596 CRYGCP07315 174 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
USP11-207ENST00000478596 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
USP11-207ENST00000478596 ATP5G2Q06055 141 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 EXOSC2Q13868 293 aaKnown RBP11.11□□□□□ -0.63
USP11-207ENST00000478596 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 OR8G2PQ6IF36 304 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 STX12Q86Y82 276 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 OR2T35Q8NGX2 323 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 OR5B12Q96R08 314 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 MBD2Q9UBB5 411 aa11.11□□□□□ -0.63
USP11-207ENST00000478596 FXYD6-FXYD2A0A087WZ82 144 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 E5RGE8 158 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 INS-IGF2F8WCM5 200 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 TSC22D2O75157 780 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 CCNKO75909 580 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 MPC2O95563 127 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 IGLV1-40P01703 118 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 PSMB8P28062 276 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 NUP62P37198 522 aaPredicted RBP11.1□□□□□ -0.63
USP11-207ENST00000478596 RAB9AP51151 201 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 UBAC2Q8NBM4 344 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 EEF1AKMT3Q96AZ1 226 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
USP11-207ENST00000478596 OR4C12Q96R67 309 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 SPATA25Q9BR10 227 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 S4R3C0 116 aa11.1□□□□□ -0.63
USP11-207ENST00000478596 SORL1Q92673 2214 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 SMCO3A2RU48 225 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 SCGB2A1O75556 95 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 IGHV3-23P01764 117 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 TAS2R30P59541 319 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 FHL3Q13643 280 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 Q56UQ5 140 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 SMIM8Q96KF7 97 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
USP11-207ENST00000478596 C15orf62A8K5M9 175 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 NDUFB8O95169 186 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 MT-CO2P00403 227 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 CDX1P47902 265 aaPredicted RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 ETFRF1Q6IPR1 90 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 PRSS54Q6PEW0 395 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 USMG5Q96IX5 58 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 SLC25A31Q9H0C2 315 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
USP11-207ENST00000478596 RANGRFQ9HD47 186 aaPredicted RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 LYRM2Q9NU23 88 aaPredicted RBP11.08□□□□□ -0.64
USP11-207ENST00000478596 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
USP11-207ENST00000478596 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
USP11-207ENST00000478596 A8MZ25 164 aa11.07□□□□□ -0.64
USP11-207ENST00000478596 LY6G6CO95867 125 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms