RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 A0A1B0GUV1 79 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TXNDC9O14530 226 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 CD5LO43866 347 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 IGLV3-27P01718 113 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 OPN1SWP03999 348 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 MAS1P04201 325 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 HLA-DQB2P05538 268 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 CSN2P05814 226 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ADRA2AP08913 450 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 EVI2AP22794 236 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 BLVRBP30043 206 aaPredicted RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 S100A7P31151 101 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 CA7P43166 264 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 POLR2HP52434 150 aaKnown RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 DIO3P55073 304 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 KLF3P57682 345 aaPredicted RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 LOXL1Q08397 574 aaPredicted RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 BAMBIQ13145 260 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 DHRS2Q13268 280 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 MMDQ15546 238 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 IGFBP7Q16270 282 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 LTC4SQ16873 150 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM183BQ1AE95 376 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 LINC00303Q3SY05 128 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 MPV17L2Q567V2 206 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 LYRM7Q5U5X0 104 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 IL34Q6ZMJ4 242 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF497Q6ZNH5 498 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 LCNL1Q6ZST4 164 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 FAM19A3Q7Z5A8 133 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 PRNTQ86SH4 94 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 BAP18Q8IXM2 172 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM183AQ8IXX5 376 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TMEM86AQ8N2M4 240 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF283Q8N7M2 679 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF555Q8NEP9 628 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 SLC30A7Q8NEW0 376 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 OR2M3Q8NG83 312 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 FAM57AQ8TBR7 257 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 MRPL30Q8TCC3 161 aaKnown RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ACOT12Q8WYK0 555 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 SLC7A6Q92536 515 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 RPUSD4Q96CM3 377 aaKnown RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ISOC1Q96CN7 298 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 PHYHIPLQ96FC7 376 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 PDXPQ96GD0 296 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 VSIG2Q96IQ7 327 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 THTPAQ9BU02 230 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 RTL8AQ9BWD3 113 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF436Q9C0F3 470 aaPredicted RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 IMUPQ9GZP8 106 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 RPS6KB2Q9UBS0 482 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 CACNG5Q9UF02 275 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ATAD5Q96QE3 1844 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 GOLGA4Q13439 2230 aaKnown RBP2.11□□□□□ -2.07
HMGN4-202ENST00000477243 NCKAP5O14513 1909 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 PLXND1Q9Y4D7 1925 aa2.11□□□□□ -2.07
HMGN4-202ENST00000477243 ASCC3Q8N3C0 2202 aaKnown RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 A0A1B0GW54 56 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 NKX2-6A6NCS4 301 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 M0R381 172 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 CDS2O95674 445 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 IGLV2-8P01709 118 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 IGHV3-11P01762 117 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SCTP09683 121 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SMIM10L2AP0DMW4 78 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SMIM10L2BP0DMW5 78 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 NPY1RP25929 384 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ATP6V0CP27449 155 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SRIP30626 198 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ATP5G3P48201 142 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 NMUP48645 174 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 WNT4P56705 351 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 RRAS2P62070 204 aaPredicted RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 NCS1P62166 190 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SELENOWP63302 87 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ELF3P78545 371 aaPredicted RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ATP5G2Q06055 141 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 KRTAP27-1Q3LI81 207 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 MRPL2Q5T653 305 aaKnown RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 PRSS54Q6PEW0 395 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 CRIP3Q6Q6R5 217 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 LYPD2Q6UXB3 125 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SMIM29Q86T20 159 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ZNF429Q86V71 674 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 LRP11Q86VZ4 500 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 OR8I2Q8N0Y5 310 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ORMDL3Q8N138 153 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 SLC25A29Q8N8R3 303 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ZDHHC22Q8N966 263 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 TSTD1Q8NFU3 115 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 ARL11Q969Q4 196 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 RMI2Q96E14 147 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 NARS2Q96I59 477 aaKnown RBP2.1□□□□□ -2.07
HMGN4-202ENST00000477243 C2orf50Q96LR7 162 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 C18orf15Q96N68 181 aa2.1□□□□□ -2.07
HMGN4-202ENST00000477243 PDCD10Q9BUL8 212 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms