RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TOMM6Q96B49 74 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 SPIN2AQ99865 258 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 SPIN2BQ9BPZ2 258 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 MND1Q9BWT6 205 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 FAM107BQ9H098 131 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 TVP23BQ9NYZ1 205 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 MED11Q9P086 117 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 DLEC1Q9Y238 1755 aa2.61□□□□□ -1.99
VPS13D-207ENST00000476169 TIAM2Q8IVF5 1701 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 TRIP11Q15643 1979 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SVILO95425 2214 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 DHRS12A0PJE2 317 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 H3BQ85 93 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 TXNDC9O14530 226 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 ORC5O43913 435 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 CST8O60676 142 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 IGHV3-53P01767 116 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 LGALS1P09382 135 aaKnown RBP2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SMIM10L2AP0DMW4 78 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SMIM10L2BP0DMW5 78 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 IGHV3-30-3P0DP02 117 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 ATP5G3P48201 142 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 TAS2R20P59543 309 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 RBX1P62877 108 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 BIKQ13323 160 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SAMD13Q5VXD3 122 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF660Q6AZW8 331 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-207ENST00000476169 Q6Q795 121 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF322Q6U7Q0 402 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-207ENST00000476169 C16orf47Q6ZP98 133 aaPredicted RBP2.6□□□□□ -1.99
VPS13D-207ENST00000476169 Q6ZQT7 251 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SSX8Q7RTT4 187 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 Q8N9L7 120 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 MBD3L1Q8WWY6 194 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 SLC7A6Q92536 515 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 IGF2BP2-AS1Q96M15 143 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF285Q96NJ3 590 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 TAS2R7Q9NYW3 318 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 GINS2Q9Y248 185 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 S4R3C0 116 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 CCDC171Q6TFL3 1326 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 DLG5Q8TDM6 1919 aa2.6□□□□□ -1.99
VPS13D-207ENST00000476169 PCM1Q15154 2024 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 DOCK9Q9BZ29 2069 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 FER1L6Q2WGJ9 1857 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 A0A087WUU8 490 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 GGT3PA6NGU5 568 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 LY6HO94772 140 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 APOA2P02652 100 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 PRM2P04554 102 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HMGN1P05114 100 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF286BP0CG31 522 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 CCL5P13501 91 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BOP23527 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 CRHBPP24387 322 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BBP33778 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 CD200P41217 278 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 LPAR6P43657 344 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 PSMD8P48556 350 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 EMP1P54849 157 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BDP58876 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 TAS2R30P59541 319 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BCP62807 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST2H2BEQ16778 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM128Q5BJH2 165 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 TMEM69Q5SWH9 247 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 LYRM7Q5U5X0 104 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 RPL22L1Q6P5R6 122 aaKnown RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF767PQ75MW2 155 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 C3orf22Q8N5N4 141 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF709Q8N972 641 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 OR10J5Q8NHC4 309 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 KLF14Q8TD94 323 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BHQ93079 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 MALSU1Q96EH3 234 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 LYSMD1Q96S90 227 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BNQ99877 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 HIST1H2BMQ99879 126 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 ZNF2Q9BSG1 426 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 RSPO3Q9BXY4 272 aaPredicted RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 KLK12Q9UKR0 248 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 FUT9Q9Y231 359 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 TICRRQ7Z2Z1 1910 aa2.59□□□□□ -1.99
VPS13D-207ENST00000476169 GOLGB1Q14789 3259 aaKnown RBP2.59□□□□□ -1.99
VPS13D-207ENST00000476169 SCN9AQ15858 1988 aa2.59□□□□□ -2
VPS13D-207ENST00000476169 PLIN4Q96Q06 1357 aa2.59□□□□□ -2
VPS13D-207ENST00000476169 PAPPA2Q9BXP8 1791 aa2.59□□□□□ -2
VPS13D-207ENST00000476169 CHD5Q8TDI0 1954 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 SCN1AP35498 2009 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 IGLV3-12A0A075B6K2 115 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 IGHV3-73A0A0B4J1V6 119 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 GRIFINA4D1Z8 144 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 RIIAD1A6NNX1 92 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 C16orf90A8MZG2 172 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 E7EQ34 232 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 J3QRK9 145 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 NDUFB2O95178 105 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 DHFRP00374 187 aa2.58□□□□□ -2
VPS13D-207ENST00000476169 IFNA10P01566 189 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms