RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C18orf12Q96KH6 178 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 PKIBQ9C010 78 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 LOC105371242A0A075B767 164 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 C2CD4DB7Z1M9 353 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 FAM60AQ9NP50 221 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 PILRAQ9UKJ1 303 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF257Q9Y2Q1 563 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 TGFAP01135 160 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 OR9G1Q8NH87 305 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 MS4A6AQ9H2W1 248 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 COL4A2P08572 1712 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 NPIPB11E5RHQ5 1161 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 PROB1E7EW31 1015 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 ODF3L1Q8IXM7 274 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 EEF1AKMT3Q96AZ1 226 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 WNT10AQ9GZT5 417 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 C5orf42Q9H799 3197 aa9.74□□□□□ -0.85
U2AF1-209ENST00000475639 PHF3Q92576 2039 aaKnown RBP9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ATG2AQ2TAZ0 1938 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 NKX2-8O15522 239 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 SNAI2O43623 268 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 APOHP02749 345 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-209ENST00000475639 LHX8Q68G74 356 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 MAFAQ8NHW3 353 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-209ENST00000475639 GPR146Q96CH1 333 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF319Q9P2F9 582 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 H3BUT2 72 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 NBEAP1P0C6P0 100 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ACSF3Q4G176 576 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-209ENST00000475639 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 Q6AWC8 147 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 H3BTX0 84 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 LILRA1O75019 489 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 CCL3P10147 92 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 C9orf50Q5SZB4 431 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF562Q6V9R5 426 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF645Q8N7E2 425 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
U2AF1-209ENST00000475639 DCTN5Q9BTE1 182 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 CALYQ9NYX4 217 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 TRAV1-1A0A0B4J248 108 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 IGHV3-35A0A0C4DH35 117 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 SYNGR3O43761 229 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 Q6ZWC4 215 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 ITLN1Q8WWA0 313 aa9.73□□□□□ -0.85
U2AF1-209ENST00000475639 A8MWV9 139 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 SCTP09683 121 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 TMEM186Q96B77 213 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
U2AF1-209ENST00000475639 A0A1B0GW15 77 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 GCHFRP30047 84 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 Q6ZVH6 145 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 FAM89BQ8N5H3 189 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 RNF182Q8N6D2 247 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 SSC4DQ8WTU2 575 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 YAE1D1Q9NRH1 226 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 NHP2Q9NX24 153 aaKnown RBP9.72□□□□□ -0.85
U2AF1-209ENST00000475639 COL4A6Q14031 1691 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 HOXA3O43365 443 aaPredicted RBP9.72□□□□□ -0.85
U2AF1-209ENST00000475639 WISP1O95388 367 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
U2AF1-209ENST00000475639 TRGV2A0A075B6R0 118 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.85
U2AF1-209ENST00000475639 CDKN1AP38936 164 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 WDR82Q6UXN9 313 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 ORMDL3Q8N138 153 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 LAMTOR2Q9Y2Q5 125 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 CPAMD8Q8IZJ3 1885 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 OR2H2O95918 312 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 PPBPP02775 128 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 COX6B1P14854 86 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 LIFP15018 202 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 ZNF146Q15072 292 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 ASCL4Q6XD76 172 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 IMMP2LQ96T52 175 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 VKORC1Q9BQB6 163 aa9.71□□□□□ -0.85
U2AF1-209ENST00000475639 MALP21145 153 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 MESP2Q0VG99 397 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 C1QL2Q7Z5L3 287 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 IDI2-AS1Q9NZ38 188 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 R4GN57 208 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 ZG16O60844 167 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 HTN3P15516 51 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 RPL23P62829 140 aaKnown RBP9.71□□□□□ -0.86
U2AF1-209ENST00000475639 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 EDA2RQ9HAV5 297 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 SERGEFQ9UGK8 458 aa9.71□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 PPIAL4GP0DN37 164 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 CCL4P13236 92 aa9.7□□□□□ -0.86
U2AF1-209ENST00000475639 IFI27P40305 119 aaPredicted RBP9.7□□□□□ -0.86
U2AF1-209ENST00000475639 ZNF585BQ52M93 769 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms