RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SLC45A2Q9UMX9 530 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 IGHV7-81A0A0B4J1V7 117 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 F8W036 122 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PPT1P50897 306 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PRR20EP86478 221 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PRR20CP86479 221 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PRR20DP86480 221 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PRR20BP86481 221 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 PRR20AP86496 221 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 TMEM249Q2WGJ8 235 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 TMEM219Q86XT9 240 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 SSX3Q99909 188 aa14.36□□□□□ -0.11
SMC4-211ENST00000469858 A0A1W2PPV4 95 aa14.35□□□□□ -0.11
SMC4-211ENST00000469858 MT-CO2P00403 227 aa14.35□□□□□ -0.11
SMC4-211ENST00000469858 HLA-DRB1P01911 266 aa14.35□□□□□ -0.11
SMC4-211ENST00000469858 GATA2P23769 480 aaPredicted RBP14.35□□□□□ -0.11
SMC4-211ENST00000469858 PRSS57Q6UWY2 283 aa14.35□□□□□ -0.11
SMC4-211ENST00000469858 HSPB9Q9BQS6 159 aa14.35□□□□□ -0.11
SMC4-211ENST00000469858 ZFP92A6NM28 416 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 SEC14L6B5MCN3 397 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 J3QLI3 93 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 CRYGCP07315 174 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 FBP1P09467 338 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 LINC00869P0C866 280 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 ASPHD1Q5U4P2 390 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 PIFOQ8TCI5 191 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 ZFHX3Q15911 3703 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 DEFA5Q01523 94 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 C22orf15Q8WYQ4 148 aa14.34□□□□□ -0.11
SMC4-211ENST00000469858 SCO1O75880 301 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 CYP2G1PQ6ZSU1 146 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 IQCF2Q8IXL9 164 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 RBM14Q96PK6 669 aaKnown RBP14.33□□□□□ -0.12
SMC4-211ENST00000469858 TMPRSS5Q9H3S3 457 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 SH2D7A6NKC9 451 aaPredicted RBP14.33□□□□□ -0.12
SMC4-211ENST00000469858 C5orf56Q8N8D9 126 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 THAP8Q8NA92 274 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 RXFP4Q8TDU9 374 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 SEC11CQ9BY50 192 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 MOB4Q9Y3A3 225 aa14.33□□□□□ -0.12
SMC4-211ENST00000469858 IGKV1D-37A0A075B6S9 117 aa14.32□□□□□ -0.12
SMC4-211ENST00000469858 NPIPB5A8MRT5 1133 aa14.32□□□□□ -0.12
SMC4-211ENST00000469858 EGR2P11161 476 aaPredicted RBP14.32□□□□□ -0.12
SMC4-211ENST00000469858 ZNF90Q03938 601 aa14.32□□□□□ -0.12
SMC4-211ENST00000469858 ICAM4Q14773 271 aa14.32□□□□□ -0.12
SMC4-211ENST00000469858 ZNF506Q5JVG8 444 aa14.32□□□□□ -0.12
SMC4-211ENST00000469858 LOC102723971A0A1B0GUV8 181 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 TCRBV4S1A1TA0A5B7 111 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 H3BUX3 64 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 I3L2K1 104 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 BCL2P10415 239 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 LY6EQ16553 131 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 TMEM116Q8NCL8 245 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 OR1L6Q8NGR2 347 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 SEPSECSQ9HD40 501 aaKnown RBP14.31□□□□□ -0.12
SMC4-211ENST00000469858 CSPG4Q6UVK1 2322 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 PRRC2AP48634 2157 aaKnown RBP14.31□□□□□ -0.12
SMC4-211ENST00000469858 RHOBP62745 196 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 C10orf91Q5T1B1 145 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 SPATA31B1PQ5VZV4 182 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 TTC9CQ8N5M4 171 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 SLC35B3Q9H1N7 401 aa14.31□□□□□ -0.12
SMC4-211ENST00000469858 CARHSP1Q9Y2V2 147 aaKnown RBP14.31□□□□□ -0.12
SMC4-211ENST00000469858 MDFIC2A0A1B0GVS7 189 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 ATP6V0E1O15342 81 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 IFNA1P01562 189 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 GUCA2BQ16661 112 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 KHDC3LQ587J8 217 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 WFDC11Q8NEX6 87 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 OR5T1Q8NG75 326 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 SMDT1Q9H4I9 107 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 TNFRSF19Q9NS68 423 aa14.3□□□□□ -0.12
SMC4-211ENST00000469858 K7EIM0 57 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 ECSCRQ19T08 205 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 FAM78BQ5VT40 261 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 GSX1Q9H4S2 264 aaPredicted RBP14.29□□□□□ -0.12
SMC4-211ENST00000469858 ARL14EPLP0DKL9 152 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 SLC35E3Q7Z769 313 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 BCL6BQ8N143 479 aaPredicted RBP14.29□□□□□ -0.12
SMC4-211ENST00000469858 FANCD2OSQ96PS1 177 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 TMUB1Q9BVT8 246 aa14.29□□□□□ -0.12
SMC4-211ENST00000469858 IGLV11-55A0A075B6I3 123 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 TSPAN9O75954 239 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 HSPB1P04792 205 aaKnown RBP14.28□□□□□ -0.12
SMC4-211ENST00000469858 STAG3L2P0CL84 134 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 STAG3L3P0CL85 134 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 CEBPGP53567 150 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 SELENOTP62341 195 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 ATRAIDQ6UW56 229 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 UNQ5815/PRO19632Q6UWF5 114 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
SMC4-211ENST00000469858 SVBPQ8N300 66 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 GATAD1Q8WUU5 269 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 TRGV9Q99603 122 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 DOK5Q9P104 306 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 ZANQ9Y493 2812 aa14.28□□□□□ -0.12
SMC4-211ENST00000469858 LINC01548A6NM66 108 aa14.27□□□□□ -0.12
SMC4-211ENST00000469858 AMY1AP04745 511 aa14.27□□□□□ -0.12
SMC4-211ENST00000469858 SRP19P09132 144 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms