RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CA2P00918 260 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 RELBQ01201 579 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 RTL8BQ17RB0 113 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 DEFB113Q30KQ7 82 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 STUMQ69YW2 141 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 FAM53AQ6NSI3 398 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-205ENST00000469550 MDP1Q86V88 176 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 ZNF439Q8NDP4 499 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 OR4P4Q8NGL7 312 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 MRGPRDQ8TDS7 321 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 RCHY1Q96PM5 261 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 COMMD5Q9GZQ3 224 aa7.84□□□□□ -1.15
HDAC3-205ENST00000469550 ABCA4P78363 2273 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 C15orf65H3BRN8 121 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 SPINT2O43291 252 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 SMPD2O60906 423 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 PROP1O75360 226 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 PMCHP20382 165 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 SRIP30626 198 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 KIR2DS2P43631 304 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 GABRA2P47869 451 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 ERVK-16P61578 105 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 SPATA31B1PQ5VZV4 182 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 RNASE8Q8TDE3 154 aaKnown RBP7.83□□□□□ -1.16
HDAC3-205ENST00000469550 C19orf24Q9BVV8 132 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 BEX4Q9NWD9 120 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-205ENST00000469550 PSG11Q9UQ72 335 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 USF3Q68DE3 2245 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 AKAP6Q13023 2319 aa7.83□□□□□ -1.16
HDAC3-205ENST00000469550 TRAV9-2A0A087WT02 112 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 IGHV2OR16-5A0A0B4J2B6 119 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 IGHV1-69-2A0A0G2JMI3 117 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 FCGR3BO75015 233 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 FOXH1O75593 365 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 CGAP01215 116 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 APCSP02743 223 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 GRPP07492 148 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 LINC00869P0C866 280 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 GPR12P47775 334 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 CEBPDP49716 269 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-205ENST00000469550 PPOXP50336 477 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
HDAC3-205ENST00000469550 KLF5Q13887 457 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-205ENST00000469550 COTL1Q14019 142 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 ACP7Q6ZNF0 438 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 PQLC2Q6ZP29 291 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 C11orf53Q8IXP5 236 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 ABHD12Q8N2K0 398 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 C9orf106Q8NAJ2 232 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 SSMEM1Q8WWF3 244 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 TRIB1Q96RU8 372 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 CLCF1Q9UBD9 225 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 TCF19Q9Y242 345 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 FREM1Q5H8C1 2179 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-205ENST00000469550 IGLV2-8P01709 118 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 CRYBB3P26998 211 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 HOXC12P31275 282 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 LINC00205P59089 165 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 Q8TCH9 128 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 NEUROG1Q92886 237 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 CLEC7AQ9BXN2 247 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 TECRQ9NZ01 308 aaKnown RBP7.82□□□□□ -1.16
HDAC3-205ENST00000469550 JPT1Q9UK76 154 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 PPIAL4AQ9Y536 164 aa7.82□□□□□ -1.16
HDAC3-205ENST00000469550 MED12LQ86YW9 2145 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 IGHV2-70DA0A0C4DH43 119 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 A0A1W2PRE2 83 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 IGLC7A0M8Q6 106 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 H0YJW9 148 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 NPY1RP25929 384 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 SSTR5P35346 364 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 PSG5Q15238 335 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 CR1LQ2VPA4 569 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 KIAA1644Q3SXP7 199 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 IBA57Q5T440 356 aaKnown RBP7.81□□□□□ -1.16
HDAC3-205ENST00000469550 Q6ZR03 302 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 FAM231DQ6ZW35 169 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 FAM90A1Q86YD7 464 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 MUC15Q8N387 334 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 SLC24A4Q8NFF2 622 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 OR8B3Q8NGG8 313 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 IGF2BP2-AS1Q96M15 143 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 OR8B2Q96RD0 313 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 RNASE7Q9H1E1 156 aaKnown RBP7.81□□□□□ -1.16
HDAC3-205ENST00000469550 ZNF331Q9NQX6 463 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-205ENST00000469550 FLNAP21333 2647 aaKnown RBP7.81□□□□□ -1.16
HDAC3-205ENST00000469550 ACANP16112 2415 aa7.81□□□□□ -1.16
HDAC3-205ENST00000469550 A0A1W2PN81 502 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 C15orf61A6NNL5 157 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 TNFSF4P23510 183 aa7.8□□□□□ -1.16
HDAC3-205ENST00000469550 ATP5IP56385 69 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 HSPE1P61604 102 aaKnown RBP7.8□□□□□ -1.16
HDAC3-205ENST00000469550 MIR17HGQ75NE6 70 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms