RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 LPCAT3Q6P1A2 487 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 C5orf46Q6UWT4 87 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 TOMM20LQ6UXN7 152 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 FA2HQ7L5A8 372 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SLC16A13Q7RTY0 426 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF550Q7Z398 422 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ANGPTL5Q86XS5 388 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 MALSU1Q96EH3 234 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SLC25A44Q96H78 314 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 PPP3R2Q96LZ3 170 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 EFCAB11Q9BUY7 163 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 GNB1LQ9BYB4 327 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 PRO3102Q9H379 93 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 FAM60AQ9NP50 221 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 LHX9Q9NQ69 397 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 PRTFDC1Q9NRG1 225 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 C14orf105Q9NVL8 296 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 MED11Q9P086 117 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SMAD5-AS1Q9Y6J3 95 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM56-RWDD3S4R434 201 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 VCANP13611 3396 aa2.51□□□□□ -2.01
HMGB1P25-201ENST00000468402 ARHGAP21Q5T5U3 1957 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 A0A096LNJ9 63 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 DHRS12A0PJE2 317 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 CCDC160A6NGH7 325 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 H0YGG7 62 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 LGALS9O00182 355 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 SCO1O75880 301 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 FGF6P10767 208 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF823P16415 610 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 CMPK1P30085 196 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 GABRA3P34903 492 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF133P52736 654 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 HBA1P69905 142 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 BTG2P78543 158 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 MEF2CQ06413 473 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 SURF2Q15527 256 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEFB116Q30KQ4 102 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 FBXL19-AS1Q494R0 122 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 MESTQ5EB52 335 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 C16orf47Q6ZP98 133 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 TCF23Q7RTU1 214 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 C1orf158Q8N1D5 194 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 CYB561D1Q8N8Q1 229 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR9Q1Q8NGQ5 310 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR9A2Q8NGT5 310 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 OR5H2Q8NGV7 314 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNF675Q8TD23 568 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 APOBEC3DQ96AK3 386 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 GALMQ96C23 342 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 FXYD5Q96DB9 178 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ABHD14BQ96IU4 210 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 SERPINI1Q99574 410 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 HSPB9Q9BQS6 159 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 VPS25Q9BRG1 176 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 MS4A8Q9BY19 250 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 YIPF3Q9GZM5 350 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 SH3BGRL3Q9H299 93 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 RPP21Q9H633 154 aaKnown RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ACER3Q9NUN7 267 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 MRPL27Q9P0M9 148 aaKnown RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 ZNRD1Q9P1U0 126 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 COPZ2Q9P299 210 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 DHCR7Q9UBM7 475 aaKnown RBP2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 SS18L2Q9UHA2 77 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 LAMTOR3Q9UHA4 124 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 PRNDQ9UKY0 176 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 AP4S1Q9Y587 144 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 PXMP4Q9Y6I8 212 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 CFAP54Q96N23 3096 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 CACNA1EQ15878 2313 aa2.5□□□□□ -2.01
HMGB1P25-201ENST00000468402 DMDP11532 3685 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 CACNA1CQ13936 2221 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ALPK2Q86TB3 2170 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 LOC102724200A0A096LPH7 203 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 A0A096LPI6 279 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TCRBV3S1A0A5B6 114 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TMEM223A0PJW6 202 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TRAPPC13A5PLN9 417 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 PINLYPA6NC86 204 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 CPSF4LA6NMK7 179 aaKnown RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 C8orf87E5RJ46 101 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 H0YJW9 148 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 H3BSA7 217 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 NDUFA2O43678 99 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 TCF21O43680 179 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 GSTZ1O43708 216 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 DEDDO75618 318 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 IGHV3-11P01762 117 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 HLA-DQA1P01909 254 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 HLA-DRB1P01911 266 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 DBIP07108 87 aaKnown RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 PFN1P07737 140 aaKnown RBP2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 SPI1P17947 270 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 ORM2P19652 201 aa2.49□□□□□ -2.01
HMGB1P25-201ENST00000468402 IL3RAP26951 378 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms