RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 SOSTQ9BQB4 213 aa11.67□□□□□ -0.54
SCAP-209ENST00000465628 IGKV3-7A0A075B6H7 116 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 IGHV7-4-1A0A0J9YVY3 117 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
SCAP-209ENST00000465628 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
SCAP-209ENST00000465628 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
SCAP-209ENST00000465628 LYL1P12980 280 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 TMEM187Q14656 261 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 TRIQKQ629K1 86 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 LGI3Q8N145 548 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 SLC24A4Q8NFF2 622 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 OR52E5Q8NH55 327 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 GGTLC1Q9BX51 225 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 RBM38Q9H0Z9 239 aaKnown RBP11.66□□□□□ -0.54
SCAP-209ENST00000465628 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCAP-209ENST00000465628 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
SCAP-209ENST00000465628 TRAV14DV4A0A0A6YYC5 116 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 ZNF701M0R085 212 aaPredicted RBP11.65□□□□□ -0.54
SCAP-209ENST00000465628 TSPAN4O14817 238 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 TFPI2P48307 235 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 ZNF79Q15937 498 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 SMPXQ9UHP9 88 aa11.65□□□□□ -0.54
SCAP-209ENST00000465628 LOC102724200A0A096LPH7 203 aaPredicted RBP11.64□□□□□ -0.55
SCAP-209ENST00000465628 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
SCAP-209ENST00000465628 SMCO1Q147U7 214 aa11.64□□□□□ -0.55
SCAP-209ENST00000465628 ZFAND6Q6FIF0 208 aa11.64□□□□□ -0.55
SCAP-209ENST00000465628 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
SCAP-209ENST00000465628 OR1S1Q8NH92 325 aa11.64□□□□□ -0.55
SCAP-209ENST00000465628 RNF2Q99496 336 aa11.64□□□□□ -0.55
SCAP-209ENST00000465628 A0A0B4J2A0 478 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 IGHV3-66A0A0C4DH42 116 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 CHEK1O14757 476 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 CLN5O75503 358 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 IFNA10P01566 189 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 NPY1RP25929 384 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 CCR6P51684 374 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 LYZL2Q7Z4W2 148 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 NARS2Q96I59 477 aaKnown RBP11.63□□□□□ -0.55
SCAP-209ENST00000465628 OR10C1Q96KK4 312 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 FNDC4Q9H6D8 234 aaPredicted RBP11.63□□□□□ -0.55
SCAP-209ENST00000465628 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 SHPKQ9UHJ6 478 aa11.63□□□□□ -0.55
SCAP-209ENST00000465628 RND2P52198 227 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 APOC4P55056 127 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 SUPT4H1P63272 117 aaKnown RBP11.62□□□□□ -0.55
SCAP-209ENST00000465628 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 AARDQ4LEZ3 155 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 GBGT1Q8N5D6 347 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 RNASEH2CQ8TDP1 164 aaKnown RBP11.62□□□□□ -0.55
SCAP-209ENST00000465628 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 METTL26Q96S19 204 aa11.62□□□□□ -0.55
SCAP-209ENST00000465628 SLC25A21Q9BQT8 299 aaPredicted RBP11.62□□□□□ -0.55
SCAP-209ENST00000465628 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 DNASE2O00115 360 aaPredicted RBP11.61□□□□□ -0.55
SCAP-209ENST00000465628 TMEM50AO95807 157 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 TIGITQ495A1 244 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 C2orf83Q53S99 150 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 TMEM128Q5BJH2 165 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 CASC10Q5T4H9 136 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
SCAP-209ENST00000465628 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 CENPSQ8N2Z9 138 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 DTD1Q8TEA8 209 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 DEDD2Q8WXF8 326 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 ACY3Q96HD9 319 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 SRRQ9GZT4 340 aa11.61□□□□□ -0.55
SCAP-209ENST00000465628 MRPL36Q9P0J6 103 aaKnown RBP11.61□□□□□ -0.55
SCAP-209ENST00000465628 PAIP2BQ9ULR5 123 aaKnown RBP11.61□□□□□ -0.55
SCAP-209ENST00000465628 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 A0A1B0GU03 582 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 IFNA4P05014 189 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 SLC25A4P12235 298 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 RPL35AP18077 110 aaKnown RBP11.6□□□□□ -0.55
SCAP-209ENST00000465628 RBMS2Q15434 407 aaKnown RBP11.6□□□□□ -0.55
SCAP-209ENST00000465628 MLANAQ16655 118 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 ODF3L2Q3SX64 289 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 NMSQ5H8A3 153 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 OR1S2Q8NGQ3 325 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 RBKSQ9H477 322 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 ZFAND3Q9H8U3 227 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 NBEAL2Q6ZNJ1 2754 aa11.6□□□□□ -0.55
SCAP-209ENST00000465628 KMT2CQ8NEZ4 4911 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms