RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HIPK2Q9H2X6 1198 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 PALMDQ9NP74 551 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
ERCC3-206ENST00000462306 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
ERCC3-206ENST00000462306 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 UFC1Q9Y3C8 167 aa11.98□□□□□ -0.49
ERCC3-206ENST00000462306 NUPL2O15504 423 aaKnown RBP11.97□□□□□ -0.49
ERCC3-206ENST00000462306 GNG7O60262 68 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 TCRBP04435 133 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 NPBWR1P48145 328 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 ZNF846Q147U1 533 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 DTD1Q8TEA8 209 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 DYNLRB2Q8TF09 96 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 MARC2Q969Z3 335 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 B9D2Q9BPU9 175 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 WDR12Q9GZL7 423 aaKnown RBP11.97□□□□□ -0.49
ERCC3-206ENST00000462306 C20orf85Q9H1P6 137 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 MLXQ9UH92 298 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
ERCC3-206ENST00000462306 ZNF785A8K8V0 405 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 ADAP1O75689 374 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 TMEM50AO95807 157 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 NPY1RP25929 384 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 OPRK1P41145 380 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 RELQ04864 619 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-206ENST00000462306 ASAH1Q13510 395 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 C4orf46Q504U0 113 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 OR4X1Q8NH49 305 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 RNASEH2CQ8TDP1 164 aaKnown RBP11.96□□□□□ -0.49
ERCC3-206ENST00000462306 DAZ1Q9NQZ3 744 aaKnown RBP11.96□□□□□ -0.49
ERCC3-206ENST00000462306 MRPL27Q9P0M9 148 aaKnown RBP11.96□□□□□ -0.49
ERCC3-206ENST00000462306 SELENOKQ9Y6D0 94 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 U3KQ87 197 aa11.96□□□□□ -0.49
ERCC3-206ENST00000462306 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
ERCC3-206ENST00000462306 FAM90A26D6RGX4 464 aa11.95□□□□□ -0.5
ERCC3-206ENST00000462306 K7EMT4 169 aa11.95□□□□□ -0.5
ERCC3-206ENST00000462306 UPK1BO75841 260 aa11.95□□□□□ -0.5
ERCC3-206ENST00000462306 COQ8AQ8NI60 647 aa11.95□□□□□ -0.5
ERCC3-206ENST00000462306 DNAH9Q9NYC9 4486 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 TRAV6A0A075B6T7 132 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 C15orf62A8K5M9 175 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 CLN5O75503 358 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 IFNA10P01566 189 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 IFITM3Q01628 133 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 TMEM61Q8N0U2 210 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 OR52B4Q8NGK2 314 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 MITD1Q8WV92 249 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 WDR89Q96FK6 387 aaPredicted RBP11.94□□□□□ -0.5
ERCC3-206ENST00000462306 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 C20orf24Q9BUV8 137 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 NUDT15Q9NV35 164 aa11.94□□□□□ -0.5
ERCC3-206ENST00000462306 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
ERCC3-206ENST00000462306 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
ERCC3-206ENST00000462306 ATP5IP56385 69 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-206ENST00000462306 CD69Q07108 199 aa11.93□□□□□ -0.5
ERCC3-206ENST00000462306 PRSS54Q6PEW0 395 aa11.93□□□□□ -0.5
ERCC3-206ENST00000462306 FAM240BA0A1B0GVZ2 78 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 SYNGR2O43760 224 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 MED6O75586 246 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 YIF1AO95070 293 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 IAPPP10997 89 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 SLC25A4P12235 298 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 ID3Q02535 119 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 MZT2BQ6NZ67 158 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 TOMM20LQ6UXN7 152 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 MAGT1Q9H0U3 335 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
ERCC3-206ENST00000462306 IFNA21P01568 189 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 RND2P52198 227 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 GUCA2BQ16661 112 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 ETFRF1Q6IPR1 90 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 GTSCR1Q86UQ5 136 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 OR4D5Q8NGN0 318 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 SEC22CQ9BRL7 303 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 ZFAND3Q9H8U3 227 aa11.91□□□□□ -0.5
ERCC3-206ENST00000462306 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
ERCC3-206ENST00000462306 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 TRAV25A0A0B4J276 109 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 A8MZ25 164 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 IFNA4P05014 189 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 CD7P09564 240 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 FRMD6-AS1P0C7T7 363 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 IGLC1P0CG04 106 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 TIGITQ495A1 244 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 ZNF431Q8TF32 576 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-206ENST00000462306 CIB3Q96Q77 187 aaPredicted RBP11.9□□□□□ -0.5
ERCC3-206ENST00000462306 C19orf73Q9NVV2 129 aa11.9□□□□□ -0.5
ERCC3-206ENST00000462306 COL7A1Q02388 2944 aa11.9□□□□□ -0.51
ERCC3-206ENST00000462306 TRAV14DV4A0A0A6YYC5 116 aa11.89□□□□□ -0.51
ERCC3-206ENST00000462306 WRBO00258 174 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms