RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 MRGPRFQ96AM1 343 aa9.49□□□□□ -0.89
SRRT-206ENST00000460194 S100A16Q96FQ6 103 aaKnown RBP9.49□□□□□ -0.89
SRRT-206ENST00000460194 YTHDF1Q9BYJ9 559 aaKnown RBP9.49□□□□□ -0.89
SRRT-206ENST00000460194 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 EIF4EP06730 217 aaKnown RBP9.48□□□□□ -0.89
SRRT-206ENST00000460194 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
SRRT-206ENST00000460194 HLA-DMAP28067 261 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 PPP5CP53041 499 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 ERHP84090 104 aaKnown RBP9.48□□□□□ -0.89
SRRT-206ENST00000460194 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 SPINK9Q5DT21 86 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 UBE2NLQ5JXB2 153 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 OR4A16Q8NH70 328 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 CLEC5AQ9NY25 188 aa9.48□□□□□ -0.89
SRRT-206ENST00000460194 PRSS29PA6NIE9 313 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 CLN5O75503 358 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 NPPCP23582 126 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 RPS19P39019 145 aaKnown RBP9.47□□□□□ -0.89
SRRT-206ENST00000460194 P2RY1P47900 373 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 LGALS9BQ3B8N2 356 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 OR4X1Q8NH49 305 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 RAB40CQ96S21 281 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 RABAC1Q9UI14 185 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 TBC1D24Q9ULP9 559 aa9.47□□□□□ -0.89
SRRT-206ENST00000460194 DEFB131BA0A096LNP1 70 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 CD74P04233 296 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 PRSS3P35030 304 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 RPL5P46777 297 aaKnown RBP9.46□□□□□ -0.9
SRRT-206ENST00000460194 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
SRRT-206ENST00000460194 TMEM69Q5SWH9 247 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 Q6ZR54 194 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 ZNF767PQ75MW2 155 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.9
SRRT-206ENST00000460194 A0A1W2PS18 150 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 RND3P61587 244 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 CROCCP3Q8IVE0 287 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 SAMD12Q8N8I0 201 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 GLMPQ8WWB7 406 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 TP53RKQ96S44 253 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 TMEM231Q9H6L2 316 aa9.45□□□□□ -0.9
SRRT-206ENST00000460194 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 P0DMU3 169 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 FAM231AP0DMU4 169 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 FAM231CP0DMU5 169 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 SNCAP37840 140 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 ETV6P41212 452 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 ZNF705AQ6ZN79 300 aaPredicted RBP9.44□□□□□ -0.9
SRRT-206ENST00000460194 Q6ZRM9 215 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 LHFPL1Q86WI0 220 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 METTL26Q96S19 204 aa9.44□□□□□ -0.9
SRRT-206ENST00000460194 ZNF705FA8MVS1 300 aaPredicted RBP9.43□□□□□ -0.9
SRRT-206ENST00000460194 M0R2N4 97 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 CORTO00230 105 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 ZNF705DP0CH99 300 aaPredicted RBP9.43□□□□□ -0.9
SRRT-206ENST00000460194 ZNF705BP0CI00 300 aaPredicted RBP9.43□□□□□ -0.9
SRRT-206ENST00000460194 TSPAN5P62079 268 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 NEDD8Q15843 81 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 TIGITQ495A1 244 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 KCTD21Q4G0X4 260 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 NEU1Q99519 415 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 NDUFAF3Q9BU61 184 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 SEPSECSQ9HD40 501 aaKnown RBP9.43□□□□□ -0.9
SRRT-206ENST00000460194 HSPG2P98160 4391 aa9.43□□□□□ -0.9
SRRT-206ENST00000460194 H3BMM0 161 aa9.42□□□□□ -0.9
SRRT-206ENST00000460194 YIPF6Q96EC8 236 aa9.42□□□□□ -0.9
SRRT-206ENST00000460194 SCPEP1Q9HB40 452 aa9.42□□□□□ -0.9
SRRT-206ENST00000460194 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 NXPH3O95157 252 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 PI3P19957 117 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 S100GP29377 79 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 OPRK1P41145 380 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 SUB1P53999 127 aaKnown RBP eCLIP9.41□□□□□ -0.9
SRRT-206ENST00000460194 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
SRRT-206ENST00000460194 DHRS2Q13268 280 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
SRRT-206ENST00000460194 PSMG4Q5JS54 123 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 PRSS54Q6PEW0 395 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 SLC35G3Q8N808 338 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 TMEM170AQ8WVE7 144 aa9.41□□□□□ -0.9
SRRT-206ENST00000460194 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
SRRT-206ENST00000460194 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 HELTA6NFD8 242 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 M0QYG6 137 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 BUB3O43684 328 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 IFNA17P01571 189 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 UCP1P25874 307 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 RCVRNP35243 200 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 PIGPP57054 158 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 ZNF575Q86XF7 245 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 TMEM230Q96A57 120 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
SRRT-206ENST00000460194 C3orf85A0A1B0GTC6 90 aa9.39□□□□□ -0.91
SRRT-206ENST00000460194 APOA1P02647 267 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms