RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
SCARNA2-201ENST00000458748 GPR146Q96CH1 333 aa13.18□□□□□ -0.3
SCARNA2-201ENST00000458748 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 CD5P06127 495 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 CD7P09564 240 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 PVRIGQ6DKI7 326 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
SCARNA2-201ENST00000458748 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 TRAV14DV4A0A0A6YYC5 116 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 C3orf84H3BNL1 204 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 TSPAN4O14817 238 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 SMCO1Q147U7 214 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 HAGHQ16775 308 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 ETFRF1Q6IPR1 90 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 TMEM116Q8NCL8 245 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 SLC24A4Q8NFF2 622 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 RNASEH2CQ8TDP1 164 aaKnown RBP13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 OR10C1Q96KK4 312 aa13.16□□□□□ -0.3
SCARNA2-201ENST00000458748 RYR3Q15413 4870 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 OR4C46A6NHA9 309 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 CENPXA8MT69 81 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 RBMS2Q15434 407 aaKnown RBP13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 BSXQ3C1V8 233 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 C2orf83Q53S99 150 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 DEFB125Q8N687 156 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 OR4X1Q8NH49 305 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 SRRQ9GZT4 340 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
SCARNA2-201ENST00000458748 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 A0A1B0GU03 582 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 CLN5O75503 358 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 TMEM50AO95807 157 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 SLC25A4P12235 298 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 VAMP1P23763 118 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 CMC4P56277 68 aaPredicted RBP13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 ATP5IP56385 69 aaPredicted RBP13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 SUPT4H1P63272 117 aaKnown RBP13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 OR1S1Q8NH92 325 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 U3KQ87 197 aa13.14□□□□□ -0.31
SCARNA2-201ENST00000458748 IGHV3OR16-8A0A075B7F1 116 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 ZNF207O43670 478 aaKnown RBP13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 NPY1RP25929 384 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 TNFRSF9Q07011 255 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 CITED4Q96RK1 184 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 HSPB7Q9UBY9 170 aa13.13□□□□□ -0.31
SCARNA2-201ENST00000458748 A0A1W2PS18 150 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 CHEK1O14757 476 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 IFNA10P01566 189 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 TOMM20LQ6UXN7 152 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 MUC7Q8TAX7 377 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 TMED3Q9Y3Q3 217 aa13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 PUS1Q9Y606 427 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCARNA2-201ENST00000458748 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 OR1S2Q8NGQ3 325 aa13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 DTD1Q8TEA8 209 aa13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 FAM110AQ9BQ89 295 aa13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 C7orf50Q9BRJ6 194 aaKnown RBP13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 GGTLC1Q9BX51 225 aa13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 FNDC4Q9H6D8 234 aaPredicted RBP13.11□□□□□ -0.31
SCARNA2-201ENST00000458748 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 MED6O75586 246 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 NXPH3O95157 252 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 SFT2D2O95562 160 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 SLC25A6P12236 298 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 NPPCP23582 126 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 CNPY1Q3B7I2 92 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 METTL26Q96S19 204 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 RNF2Q99496 336 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 RBKSQ9H477 322 aa13.1□□□□□ -0.31
SCARNA2-201ENST00000458748 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 FAM90A26D6RGX4 464 aa13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 Q8WTZ3 238 aa13.09□□□□□ -0.31
SCARNA2-201ENST00000458748 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 NDUFB6O95139 128 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 IFNA4P05014 189 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 OR10J1P30954 320 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 RND2P52198 227 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 APOC4P55056 127 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 BAK1Q16611 211 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms