RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 CD177Q8N6Q3 437 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 ST6GALNAC3Q8NDV1 305 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 FAM168AQ92567 244 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 MRPL20Q9BYC9 149 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 FBXL15Q9H469 300 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 TECRQ9NZ01 308 aaKnown RBP6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 ZFYVE26Q68DK2 2539 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 C11orf94C9JXX5 98 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 SEC61GP60059 68 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 RNF152Q8N8N0 203 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 RNF138Q8WVD3 245 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 TAF15Q92804 592 aaKnown RBP eCLIP6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 HSPB9Q9BQS6 159 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 VAMP8Q9BV40 100 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 PXMP4Q9Y6I8 212 aa6.74□□□□□ -1.33
TMEM39A-202ENST00000438581 M0R2Z0 102 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 TM4SF5O14894 197 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 RHOGP84095 191 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 LY6G6FQ5SQ64 297 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 UNQ5815/PRO19632Q6UWF5 114 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 FAM24BQ8N5W8 94 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 CRIM1Q9NZV1 1036 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 DPM3Q9P2X0 92 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 ABCA2Q9BZC7 2435 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 A0A087WWC5 75 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 MMP9P14780 707 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 FCGR2BP31994 310 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 MEF2CQ06413 473 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 ARL16Q0P5N6 197 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 AWAT1Q58HT5 328 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 Q8WTZ3 238 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 MS4A10Q96PG2 267 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 NDFIP1Q9BT67 221 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 SAA2-SAA4A0A096LPE2 208 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 CTXND1A0A1B0GTU2 59 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 RIPPLY3P57055 190 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 C10orf113Q5VZT2 155 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 S4R3C0 116 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 FAM90A26D6RGX4 464 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 NAPSAO96009 420 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 THBDP07204 575 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 LINC00869P0C866 280 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 KHDC3LQ587J8 217 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 V9GYY9 64 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 MED12LQ86YW9 2145 aa6.73□□□□□ -1.33
TMEM39A-202ENST00000438581 MUC22E2RYF6 1773 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 TLN2Q9Y4G6 2542 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 E7EQL1 145 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 FAM157CP0CG43 387 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 RND3P61587 244 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 SERF2P84101 59 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 RELBQ01201 579 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 SRSF1Q07955 248 aaKnown RBP eCLIP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 TMEM177Q53S58 311 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 ZNF324BQ6AW86 544 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 C20orf204Q6ZNR8 217 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 PDPNQ86YL7 162 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 VN1R17PQ8TDU5 208 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 GPR82Q96P67 336 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 H0YIZ8 118 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 IGHG4P01861 327 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 PSG1P11464 419 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 LINC00205P59089 165 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 RPL32P62910 135 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 MRPL54Q6P161 138 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 LHFPL1Q86WI0 220 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 ZNF664Q8N3J9 261 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 P2RX4Q99571 388 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 MYO9AB2RTY4 2548 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 G3V4G9 280 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 YPEL1O60688 119 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 SUPT4H1P63272 117 aaKnown RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 FXYD3Q14802 87 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 Q6ZR03 302 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 NPIPB3Q92617 1050 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 C1orf147Q96MC9 270 aaPredicted RBP6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 YPEL2Q96QA6 119 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 C7orf69Q9H7B7 122 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 SRD5A3Q9H8P0 318 aa6.72□□□□□ -1.33
TMEM39A-202ENST00000438581 RNF222A6NCQ9 220 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 TMEM178BH3BS89 294 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 RS1O15537 224 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 CA2P00918 260 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 IGKV1D-33P01593 117 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 IGKV1-33P01594 117 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 TMEM97Q5BJF2 176 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 ZFAND6Q6FIF0 208 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 OR1L6Q8NGR2 347 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 TMEM167BQ9NRX6 74 aa6.71□□□□□ -1.33
TMEM39A-202ENST00000438581 IGKV1D-17A0A075B6S4 117 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 PAFAH1B2P68402 229 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 TMEM30BQ3MIR4 351 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 Q6P435 159 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 ZNF788Q6ZQV5 615 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 COQ2Q96H96 371 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 RNF126Q9BV68 326 aa6.71□□□□□ -1.34
TMEM39A-202ENST00000438581 MRPS16Q9Y3D3 137 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms