RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ADMP35318 185 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 RND2P52198 227 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 UBE2L3P68036 154 aaKnown RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 PLGLAQ15195 96 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 RTL8BQ17RB0 113 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 OR4A47Q6IF82 309 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 TMEM116Q8NCL8 245 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 SLC35E1Q96K37 410 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 NOL4LQ96MY1 436 aaPredicted RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
HPS4-205ENST00000429411 DYNLRB1Q9NP97 96 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 WDR83OSQ9Y284 106 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 TIMM9Q9Y5J7 89 aa6.66□□□□□ -1.34
HPS4-205ENST00000429411 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 RBFOX2O43251 390 aaKnown RBP eCLIP6.65□□□□□ -1.34
HPS4-205ENST00000429411 DLEU1O43261 78 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
HPS4-205ENST00000429411 JOSD1Q15040 202 aaPredicted RBP6.65□□□□□ -1.34
HPS4-205ENST00000429411 OR10W1Q8NGF6 305 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 MGST2Q99735 147 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 NDUFAF3Q9BU61 184 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 GGTLC1Q9BX51 225 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 KIAA1549Q9HCM3 1950 aa6.65□□□□□ -1.34
HPS4-205ENST00000429411 IGKV1D-17A0A075B6S4 117 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 APOA2P02652 100 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 TIMP3P35625 211 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 GATA4P43694 442 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 ZNF134P52741 427 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 UCNP55089 124 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 TPPP2P59282 170 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 TBR1Q16650 682 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 PRR30Q53SZ7 412 aaPredicted RBP6.65□□□□□ -1.35
HPS4-205ENST00000429411 GCSAMQ8N6F7 178 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 TMEM170AQ8WVE7 144 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 KCNIP2Q9NS61 270 aa6.65□□□□□ -1.35
HPS4-205ENST00000429411 K7ENP7 123 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 COX7A2P2O60397 106 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 SRP14P37108 136 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 RPEL1Q2QD12 228 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 CENPWQ5EE01 88 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 HCP5Q6MZN7 132 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 NABP2Q9BQ15 211 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 VAMP8Q9BV40 100 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 ZNF331Q9NQX6 463 aaPredicted RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 TMEM242Q9NWH2 141 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 YTHDF2Q9Y5A9 579 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 ACANP16112 2415 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 CCL3L1P16619 93 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 HSPE1P61604 102 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 RANP62826 216 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 EFNB3Q15768 340 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 HLA-DRB5Q30154 266 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 C10orf55Q5SWW7 151 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 C11orf53Q8IXP5 236 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 MMD2Q8IY49 270 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 OR9G1Q8NH87 305 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 YPEL4Q96NS1 127 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 UBTD1Q9HAC8 227 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 RNF7Q9UBF6 113 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 ANKHD1Q8IWZ3 2542 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 ADAMTS20P59510 1910 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 A0A1W2PRD5 423 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 A0A1W2PRF3 423 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 A0A1W2PRM7 423 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 M0QZK8 103 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 SS18L1O75177 396 aaPredicted RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 SERF1AO75920 110 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 BRI3O95415 125 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 MFAP4P55083 255 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 BRWD1-AS2P59051 145 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 ERHP84090 104 aaKnown RBP6.64□□□□□ -1.35
HPS4-205ENST00000429411 TGIF2LYQ8IUE0 185 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 WDR31Q8NA23 367 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 OR5AU1Q8NGC0 362 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 GP6Q9HCN6 339 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 JPT1Q9UK76 154 aa6.64□□□□□ -1.35
HPS4-205ENST00000429411 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 NPIPB11E5RHQ5 1161 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 CEACAM8P31997 349 aaPredicted RBP6.63□□□□□ -1.35
HPS4-205ENST00000429411 RAB7AP51149 207 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
HPS4-205ENST00000429411 TMEM177Q53S58 311 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 ZNF439Q8NDP4 499 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 RAB1BQ9H0U4 201 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 LPAR2Q9HBW0 351 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 SLC45A2Q9UMX9 530 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 SONP18583 2426 aaKnown RBP6.63□□□□□ -1.35
HPS4-205ENST00000429411 TRAV5A0A0B4J249 113 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 A0A1B0GV72 72 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 A0A1W2PRX2 142 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 NUPR1O60356 82 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 IGKV1-16P04430 117 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 FRMD6-AS1P0C7T7 363 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 LMO1P25800 156 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 DLX1P56177 255 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 TAS2R45P59539 299 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 UBE2G1P62253 170 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 CT45A1Q5HYN5 189 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 OR5R1Q8NH85 324 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms