RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BCL6BQ8N143 479 aaPredicted RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 STPG3Q8N7X2 389 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 FAM169BQ8N8A8 192 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 NFAM1Q8NET5 270 aaPredicted RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 IL1F10Q8WWZ1 152 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CACNG8Q8WXS5 425 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CITED1Q99966 193 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 CHAC1Q9BUX1 264 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 FGF22Q9HCT0 170 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF355PQ9NSJ1 428 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 TBC1D29Q9UFV1 150 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 AMMECR1Q9Y4X0 333 aaPredicted RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 KLF12Q9Y4X4 402 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 LSM4Q9Y4Z0 139 aaKnown RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 MPC1Q9Y5U8 109 aa4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 COL5A1P20908 1838 aaPredicted RBP4.62□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1D-43A0A0B4J1Z2 117 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 TRAV5A0A0B4J249 113 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 A0A1W2PPI3 338 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 TCRBV4S1A1TA0A5B7 111 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 MANSC4A6NHS7 340 aaPredicted RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 C15orf62A8K5M9 175 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 A8MWV9 139 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 VWC2LB2RUY7 222 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGLL5B9A064 214 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 J3KT08 172 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 HRKO00198 91 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 PEX7O00628 323 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZG16O60844 167 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 PF4V1P10720 104 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 PVRP15151 417 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 SPINK2P20155 84 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 CDAP32320 146 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 VDAC2P45880 294 aaPredicted RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 NMUP48645 174 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 UBE2L3P68036 154 aaKnown RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 RRN3P1Q2M238 152 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 TBC1D28Q2M2D7 210 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 GAB4Q2WGN9 574 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 KLF17Q5JT82 389 aaPredicted RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 MORN3Q6PF18 240 aaPredicted RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 RNF144BQ7Z419 303 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 MOB3BQ86TA1 216 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 RPS19BP1Q86WX3 136 aaKnown RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 LRRC75A-AS1Q8N1F1 130 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 DRAM1Q8N682 238 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 GATD1Q8NB37 220 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 OR5AN1Q8NGI8 311 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 Q8TCH9 128 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 MRAPQ8TCY5 172 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 PIGCQ92535 297 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 RND1Q92730 232 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 SNRNP40Q96DI7 357 aaKnown RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 DNAJC30Q96LL9 226 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 MGST2Q99735 147 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 EMC6Q9BV81 110 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 IL23AQ9NPF7 189 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 NHP2Q9NX24 153 aaKnown RBP4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 KLRF1Q9NZS2 232 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 HILPDAQ9Y5L2 63 aa4.61□□□□□ -1.67
VTI1BP4-201ENST00000427516 DOCK3Q8IZD9 2030 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1-27A0A075B6S5 117 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV3D-11A0A0A0MRZ8 115 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 TRAV25A0A0B4J276 109 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1-12A0A0C4DH73 117 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 A0A1B0GUT8 65 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 SPAARA0A1B0GVQ0 90 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 A0A1B0GX51 115 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 TMEM30CPA0ZSE6 113 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 OOEPA6NGQ2 149 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 SLC31A1O15431 190 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 SYNGR3O43761 229 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 MOSP00540 346 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1D-12P01611 117 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 APOHP02749 345 aaPredicted RBP4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 SP1P08047 785 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 SCGB1C2P0DMR2 95 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 MYF5P13349 255 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 PLNP26678 52 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 CTGFP29279 349 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 NTF4P34130 210 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF146Q15072 292 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 MIC13Q5XKP0 118 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 MOGAT3Q86VF5 341 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 PDPNQ86YL7 162 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 TMEFF1Q8IYR6 380 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF441Q8N8Z8 693 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 NRGNQ92686 78 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 BADQ92934 168 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 RPEQ96AT9 228 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IFI27L1Q96BM0 104 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 PRELID3AQ96N28 172 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF714Q96N38 554 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 NRTNQ99748 197 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 C1QTNF5Q9BXJ0 243 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 FAM234AQ9H0X4 552 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 WNT6Q9Y6F9 365 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms