RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 PIGPP57054 158 aa7□□□□□ -1.29
NUP50-205ENST00000419387 IZUMO4Q1ZYL8 232 aa7□□□□□ -1.29
NUP50-205ENST00000419387 ODF3L2Q3SX64 289 aa7□□□□□ -1.29
NUP50-205ENST00000419387 SCGB2B2Q4G0G5 96 aa7□□□□□ -1.29
NUP50-205ENST00000419387 Q6ZWC4 215 aa7□□□□□ -1.29
NUP50-205ENST00000419387 WFDC3Q8IUB2 231 aa7□□□□□ -1.29
NUP50-205ENST00000419387 TOMM5Q8N4H5 51 aa7□□□□□ -1.29
NUP50-205ENST00000419387 TMEM116Q8NCL8 245 aa7□□□□□ -1.29
NUP50-205ENST00000419387 ZFAND1Q8TCF1 268 aa7□□□□□ -1.29
NUP50-205ENST00000419387 GLYATL2Q8WU03 294 aa7□□□□□ -1.29
NUP50-205ENST00000419387 PINX1Q96BK5 328 aaKnown RBP7□□□□□ -1.29
NUP50-205ENST00000419387 OR10C1Q96KK4 312 aa7□□□□□ -1.29
NUP50-205ENST00000419387 RNF2Q99496 336 aa7□□□□□ -1.29
NUP50-205ENST00000419387 RHPN1-AS1Q9BWJ2 59 aa7□□□□□ -1.29
NUP50-205ENST00000419387 TP53TG1Q9Y2A0 90 aa7□□□□□ -1.29
NUP50-205ENST00000419387 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
NUP50-205ENST00000419387 TRAV14DV4A0A0A6YYC5 116 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 A0A0B4J293 547 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 KIR2DL5BA0A0G2JN68 375 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 KIR2DL5BA0A0G2JPC4 375 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 C3orf85A0A1B0GTC6 90 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 DISC1C4P0D8 188 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 INS-IGF2F8WCM5 200 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 SPRY2O43597 315 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 GNG7O60262 68 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 ATG12O94817 140 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 IGKV1-5P01602 117 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 BMI1P35226 326 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 CCR6P51684 374 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 CMC4P56277 68 aaPredicted RBP6.99□□□□□ -1.29
NUP50-205ENST00000419387 DHODHQ02127 395 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 SURF2Q15527 256 aaPredicted RBP6.99□□□□□ -1.29
NUP50-205ENST00000419387 SP6Q3SY56 376 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 SPINK9Q5DT21 86 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 KIR2DL5AQ8N109 375 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 STPG3Q8N7X2 389 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 KIR2DL5BQ8NHK3 375 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 LHFPL5Q8TAF8 219 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 GALNT14Q96FL9 552 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 PRRT1Q99946 306 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 COPZ2Q9P299 210 aa6.99□□□□□ -1.29
NUP50-205ENST00000419387 IGHV3-49A0A0A0MS15 119 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 CRYM-AS1A6NIL9 109 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 ST8SIA3O43173 380 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 CDS2O95674 445 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 IFNA17P01571 189 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 RPL35AP18077 110 aaKnown RBP6.98□□□□□ -1.29
NUP50-205ENST00000419387 UCP1P25874 307 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 SNCAP37840 140 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 NPBWR1P48145 328 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 AKR1C2P52895 323 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 TNFRSF9Q07011 255 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 DEFB135Q30KP9 77 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 FAM90A2PQ658T7 463 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 PVRIGQ6DKI7 326 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 SLC35G3Q8N808 338 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 CCDC71LQ8N9Z2 235 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 DUSP18Q8NEJ0 188 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 S100ZQ8WXG8 99 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 RNF183Q96D59 192 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 PDCD10Q9BUL8 212 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 CCDC32Q9BV29 185 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 TBC1D24Q9ULP9 559 aa6.98□□□□□ -1.29
NUP50-205ENST00000419387 PLECQ15149 4684 aaKnown RBP6.98□□□□□ -1.29
NUP50-205ENST00000419387 IGHV3OR16-13A0A075B7E8 117 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 IGHV3-74A0A0B4J1X5 117 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 A0A0G2JRQ6 117 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 TEX13DA0A0J9YY54 714 aaPredicted RBP6.97□□□□□ -1.29
NUP50-205ENST00000419387 LINC00854A0A1B0GVQ3 168 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 B3GALNT1O75752 331 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 NDUFB6O95139 128 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 TMEM50AO95807 157 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 CD5P06127 495 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 RNASE2P10153 161 aaKnown RBP6.97□□□□□ -1.29
NUP50-205ENST00000419387 TFPI2P48307 235 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 SUB1P53999 127 aaKnown RBP eCLIP6.97□□□□□ -1.29
NUP50-205ENST00000419387 AP3S2P59780 193 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 TMEM187Q14656 261 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 TRIM16LQ309B1 348 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 Q6ZRM9 215 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 LYG2Q86SG7 212 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 APRG1Q8IVJ8 170 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 RRNAD1Q96FB5 475 aaKnown RBP6.97□□□□□ -1.29
NUP50-205ENST00000419387 GINS3Q9BRX5 216 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 ENY2Q9NPA8 101 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 MCUBQ9NWR8 336 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 SCP2D1Q9UJQ7 156 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 FLVCR2Q9UPI3 526 aa6.97□□□□□ -1.29
NUP50-205ENST00000419387 EPPK1P58107 5090 aaKnown RBP6.97□□□□□ -1.29
NUP50-205ENST00000419387 IGKV3-7A0A075B6H7 116 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 CORTO00230 105 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 UPK1BO75841 260 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 OR5AC1P0C628 307 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 HOXA1P49639 335 aaPredicted RBP6.96□□□□□ -1.3
NUP50-205ENST00000419387 PAFAH1B2P68402 229 aa6.96□□□□□ -1.3
NUP50-205ENST00000419387 EWSR1Q01844 656 aaKnown RBP eCLIP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms