RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 HYPMO75409 117 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 IGHV1-46P01743 117 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 IGKV1-16P04430 117 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 C3orf79P0CE67 100 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 SRIP30626 198 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 GNG10P50151 68 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 MEF2CQ06413 473 aaPredicted RBP7.96□□□□□ -1.14
CD44-206ENST00000415148 FAM231DQ6ZW35 169 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 KCNS1Q96KK3 526 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 CHRDL1Q9BU40 450 aa7.96□□□□□ -1.14
CD44-206ENST00000415148 SSBP3Q9BWW4 388 aaPredicted RBP7.96□□□□□ -1.14
CD44-206ENST00000415148 YLPM1P49750 1951 aaKnown RBP7.95□□□□□ -1.14
CD44-206ENST00000415148 A0A1W2PN81 502 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 SIAH2O43255 324 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 APOA2P02652 100 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 SAA1P0DJI8 122 aaPredicted RBP7.95□□□□□ -1.14
CD44-206ENST00000415148 CHRNB4P30926 498 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 TMEM177Q53S58 311 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 ZADH2Q8N4Q0 377 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 OR1L4Q8NGR5 311 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 FAM167A-AS1Q96KT0 104 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 CCL13Q99616 98 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 GAL3ST2Q9H3Q3 398 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 ASCL3Q9NQ33 180 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 DSCAML1Q8TD84 2053 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 TRAV5A0A0B4J249 113 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 CRYABP02511 175 aaKnown RBP7.95□□□□□ -1.14
CD44-206ENST00000415148 USF1P22415 310 aaPredicted RBP7.95□□□□□ -1.14
CD44-206ENST00000415148 SLAQ13239 276 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 FAM71F2Q6NXP2 309 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 VHLLQ6RSH7 139 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 C19orf35Q6ZS72 473 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 PIP4P1Q86T03 277 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 OR9G1Q8NH87 305 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 SLC25A2Q9BXI2 301 aa7.95□□□□□ -1.14
CD44-206ENST00000415148 MRPL27Q9P0M9 148 aaKnown RBP7.95□□□□□ -1.14
CD44-206ENST00000415148 INTS1Q8N201 2190 aaKnown RBP7.94□□□□□ -1.14
CD44-206ENST00000415148 DMXL2Q8TDJ6 3036 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 TANC2Q9HCD6 1990 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 ZNF253O75346 499 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 IGLC2P0DOY2 106 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 IGLC3P0DOY3 106 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.14
CD44-206ENST00000415148 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 IGFL3Q6UXB1 125 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 SPATA12Q7Z6I5 190 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 OR5AN1Q8NGI8 311 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 VSTM2AQ8TAG5 236 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 TMEM167AQ8TBQ9 72 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 TSKUQ8WUA8 353 aa7.94□□□□□ -1.14
CD44-206ENST00000415148 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
CD44-206ENST00000415148 NKX6-3A6NJ46 265 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 APCSP02743 223 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 NTF3P20783 257 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 PRRX1P54821 245 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 RPL8P62917 257 aaKnown RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 SSBP2P81877 361 aaPredicted RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 KIR3DL3Q8N743 410 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 C8orf31Q8N9H6 132 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 NUP37Q8NFH4 326 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 NAV3Q8IVL0 2385 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 H0YJW9 148 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 CCL25O15444 150 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 LINC00614P0C842 121 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 WT1P19544 449 aaPredicted RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 GPR6P46095 362 aaPredicted RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 UBE2L3P68036 154 aaKnown RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 C1orf185Q5T7R7 199 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 Q6ZN92 141 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 LHFPL4Q7Z7J7 247 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 FAM216BQ8N7L0 139 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 THAP8Q8NA92 274 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 DEFB108BQ8NET1 73 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 OR10W1Q8NGF6 305 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 ZNF596Q8TC21 504 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 FLYWCH2Q96CP2 140 aaKnown RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 MBD6Q96DN6 1003 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 HARBI1Q96MB7 349 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 SERTAD4Q9NUC0 356 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 AMMECR1Q9Y4X0 333 aaPredicted RBP7.93□□□□□ -1.14
CD44-206ENST00000415148 KALRNO60229 2985 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 PLXNB1O43157 2135 aa7.93□□□□□ -1.14
CD44-206ENST00000415148 CD24P25063 80 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 BPIFB3P59826 476 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 C10orf113Q5VZT2 155 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 PDPNQ86YL7 162 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 STXBP6Q8NFX7 210 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 OR4C13Q8NGP0 309 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 CLEC7AQ9BXN2 247 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 ZNF430Q9H8G1 570 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms