RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TMEM213A2RRL7 107 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 MFSD2BA6NFX1 497 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 OR4C46A6NHA9 309 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 DBX1A6NMT0 343 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 CEBPZOSA8MTT3 80 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 PPP5D1E7EU14 171 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 UBE2CO00762 179 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 DFFBO76075 338 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 SCAF4O95104 1147 aaKnown RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 NDUFB6O95139 128 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 IFNA21P01568 189 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 FRMD6-AS1P0C7T7 363 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 RNASE2P10153 161 aaKnown RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 NPPCP23582 126 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 HOXA1P49639 335 aaPredicted RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 MFAP2P55001 183 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 RAB11AP62491 216 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 TNFRSF9Q07011 255 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 CD300EQ496F6 205 aaPredicted RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 LINC00322Q6ZN03 302 aaPredicted RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 S100A7AQ86SG5 101 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 Q8WTZ3 238 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 MISP3Q96FF7 219 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 NEURL2Q9BR09 285 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 CCDC32Q9BV29 185 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 SEPSECSQ9HD40 501 aaKnown RBP4.83□□□□□ -1.64
USP54-202ENST00000413442 SMPXQ9UHP9 88 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 RNF24Q9Y225 148 aa4.83□□□□□ -1.64
USP54-202ENST00000413442 KIR2DL5BA0A0G2JN68 375 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 KIR2DL5BA0A0G2JPC4 375 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 OR2T8A6NH00 312 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 OR11H12B2RN74 326 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 C3orf84H3BNL1 204 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 PITX3O75364 302 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 SFT2D2O95562 160 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 ADMP35318 185 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 OPRK1P41145 380 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 SUPT4H1P63272 117 aaKnown RBP4.82□□□□□ -1.64
USP54-202ENST00000413442 ADAMTSL5Q6ZMM2 481 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 Q6ZRM9 215 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 KIR2DL5AQ8N109 375 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 SLC24A4Q8NFF2 622 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 OR52B4Q8NGK2 314 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 KIR2DL5BQ8NHK3 375 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 COQ8AQ8NI60 647 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 TMEM230Q96A57 120 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 SPATA25Q9BR10 227 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 TM2D3Q9BRN9 247 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 CACNG5Q9UF02 275 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 TGP01266 2768 aa4.82□□□□□ -1.64
USP54-202ENST00000413442 F8W735 103 aaPredicted RBP4.81□□□□□ -1.64
USP54-202ENST00000413442 CHEK1O14757 476 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 YIF1AO95070 293 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 IFNA10P01566 189 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 IGHV3-23P01764 117 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 IL7P13232 177 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 VAMP1P23763 118 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 NPY1RP25929 384 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TAS2R30P59541 319 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 CD81P60033 236 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 GUCA2BQ16661 112 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TM4SF20Q53R12 229 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TMEM41BQ5BJD5 291 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 SAMD13Q5VXD3 122 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 FAAP20Q6NZ36 180 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 MZT2BQ6NZ67 158 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 LYZL2Q7Z4W2 148 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TMED4Q7Z7H5 227 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 SBSPONQ8IVN8 264 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TMEM61Q8N0U2 210 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 UBAC2Q8NBM4 344 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 OR1S1Q8NH92 325 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 LHFPL5Q8TAF8 219 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 DTD1Q8TEA8 209 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 PINX1Q96BK5 328 aaKnown RBP4.81□□□□□ -1.64
USP54-202ENST00000413442 METTL26Q96S19 204 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 CHRDL1Q9BU40 450 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 C20orf24Q9BUV8 137 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 VSIRQ9H7M9 311 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 MLXQ9UH92 298 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 TP53TG1Q9Y2A0 90 aa4.81□□□□□ -1.64
USP54-202ENST00000413442 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 LOC102724200A0A096LPH7 203 aaPredicted RBP4.8□□□□□ -1.64
USP54-202ENST00000413442 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 C9orf170A2RU37 121 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 HELTA6NFD8 242 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 SNRPGP15A8MWD9 76 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 FNDC10F2Z333 226 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 SYNGR2O43760 224 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 IFNA4P05014 189 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 OR4E1P0C645 316 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 ATF4P18848 351 aaPredicted RBP4.8□□□□□ -1.64
USP54-202ENST00000413442 CRYBB3P26998 211 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 APOC4P55056 127 aa4.8□□□□□ -1.64
USP54-202ENST00000413442 DEFA5Q01523 94 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms