RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ASCL2Q99929 193 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 TSSC4Q9Y5U2 329 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 TRAV34A0A0B4J273 112 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PEX7O00628 323 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 EIF3GO75821 320 aaKnown RBP eCLIP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 GRNP28799 593 aaKnown RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 FAM24BQ8N5W8 94 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 KLK15Q9H2R5 256 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PROK2Q9HC23 129 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 DOCK6Q96HP0 2047 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 MEF2BQ02080 365 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 IQCJQ1A5X6 159 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 MIR17HGQ75NE6 70 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 ABCA7Q8IZY2 2146 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 RPL29P47914 159 aaKnown RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 DAZAP2Q15038 168 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 NHLRC3Q5JS37 347 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 CIARTQ8N365 385 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 OR4C5Q8NGB2 326 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PSMG3Q9BT73 122 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PPP1R3EQ9H7J1 279 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 UNC13CQ8NB66 2214 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1D-13A0A0B4J2D9 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 SHISA9B4DS77 424 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 CGAP01215 116 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 RNASE1P07998 156 aaKnown RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 CD55P08174 381 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1-13P0DP09 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 GATA2P23769 480 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 CACNG7P62955 275 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM183BQ1AE95 376 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 REC114Q7Z4M0 266 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 AQP10Q96PS8 301 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 CHCHD5Q9BSY4 110 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 DAZ1Q9NQZ3 744 aaKnown RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 VWA8A3KMH1 1905 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 NDPQ00604 133 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 FBLN7Q53RD9 439 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 OR10J3Q5JRS4 329 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 FAM120AOSQ5T036 256 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 OR10W1Q8NGF6 305 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 SGMS2Q8NHU3 365 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 UBE2E2Q96LR5 201 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 GREB1Q4ZG55 1949 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1-27A0A075B6S5 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 SOD3P08294 240 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 C18orf12Q96KH6 178 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 RTBDNQ9BSG5 229 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 GRIFINA4D1Z8 144 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 RPL15P61313 204 aaKnown RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM249Q2WGJ8 235 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 LHFPL4Q7Z7J7 247 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 LRTM2Q8N967 370 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 FER1L6-AS1Q8NA97 138 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 OR11H1Q8NG94 326 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 RHPN1-AS1Q9BWJ2 59 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 SMDT1Q9H4I9 107 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 ZFC3H1O60293 1989 aaKnown RBP4.1□□□□□ -1.75
SCN3A-203ENST00000409101 ATP6V0E1O15342 81 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 IGHV2-5P01817 119 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 MT-ND6P03923 174 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 CENPWQ5EE01 88 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 Q6P435 159 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 KLHDC3Q9BQ90 382 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM70Q9BUB7 260 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 VPREB3Q9UKI3 123 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 SIGLEC9Q9Y336 463 aa4.1□□□□□ -1.75
SCN3A-203ENST00000409101 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 A0A1B0GWJ7 208 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 FABP5P3A8MUU1 101 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 CD8AP01732 235 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 DAD1P61803 113 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 DEFB112Q30KQ8 113 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 OVOL3O00110 214 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 RIPPLY3P57055 190 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 SRSF8Q9BRL6 282 aaKnown RBP4.09□□□□□ -1.75
SCN3A-203ENST00000409101 ST20Q9HBF5 79 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 NRN1Q9NPD7 142 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 TSC2P49815 1807 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 IGHV4-30-2A0A087WSY4 118 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 A0A087WX48 190 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 TRAV8-6A0A0B4J262 113 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 ADARB2-AS1A8MUL3 147 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 J3QR89 54 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 C11orf91Q3C1V1 193 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 C9orf139Q6ZV77 190 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF843Q8N446 348 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 CLRN3Q8NCR9 226 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 NRGNQ92686 78 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 TOMM7Q9P0U1 55 aa4.09□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF256Q9Y2P7 627 aaPredicted RBP4.09□□□□□ -1.75
SCN3A-203ENST00000409101 FCN3O75636 299 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms