RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SCGB1A1P11684 91 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 KLRB1Q12918 225 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 NMSQ5H8A3 153 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 MBNL2Q5VZF2 373 aaKnown RBP4.9□□□□□ -1.62
HDAC9-203ENST00000406072 MRPL14Q6P1L8 145 aaKnown RBP4.9□□□□□ -1.62
HDAC9-203ENST00000406072 MIR17HGQ75NE6 70 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 SYT8Q8NBV8 401 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 KCNE4Q8WWG9 221 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 CHCHD1Q96BP2 118 aaKnown RBP4.9□□□□□ -1.62
HDAC9-203ENST00000406072 BOKQ9UMX3 212 aaPredicted RBP4.9□□□□□ -1.62
HDAC9-203ENST00000406072 MPC1Q9Y5U8 109 aa4.9□□□□□ -1.62
HDAC9-203ENST00000406072 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.9□□□□□ -1.63
HDAC9-203ENST00000406072 ETV2O00321 342 aaPredicted RBP4.9□□□□□ -1.63
HDAC9-203ENST00000406072 SYNGR1O43759 233 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 TOMM40O96008 361 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 IGKV3-11P04433 115 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 PRSS2P07478 247 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 CELA3AP09093 270 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 CSRP1P21291 193 aaKnown RBP4.9□□□□□ -1.63
HDAC9-203ENST00000406072 TCF15Q12870 199 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF585BQ52M93 769 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 C2orf83Q53S99 150 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 SLC25A47Q6Q0C1 308 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 WDR82Q6UXN9 313 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 VKORC1L1Q8N0U8 176 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 OR10X1Q8NGY0 326 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 PRELID3AQ96N28 172 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 MAP1LC3AQ9H492 121 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 DLL3Q9NYJ7 618 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 ZDBF2Q9HCK1 2354 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 RALGAPA1Q6GYQ0 2036 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 PHF3Q92576 2039 aaKnown RBP4.9□□□□□ -1.63
HDAC9-203ENST00000406072 A0A1B0GUT8 65 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 A0A1W2PRD5 423 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 A0A1W2PRF3 423 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 A0A1W2PRM7 423 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 QRFPP83859 136 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 FAM27BQ5VT28 67 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 OR1L1Q8NH94 360 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 SNRNP40Q96DI7 357 aaKnown RBP4.9□□□□□ -1.63
HDAC9-203ENST00000406072 RCHY1Q96PM5 261 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 FOXC2Q99958 501 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 TNFRSF19Q9NS68 423 aa4.9□□□□□ -1.63
HDAC9-203ENST00000406072 ARHGAP21Q5T5U3 1957 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A10PA6NDY2 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A18PA6NE21 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A16PA6NEW6 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A20PA6NIJ5 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A8PA6NJQ4 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A7PA6NKC0 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A22PA8MWA6 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A12PA8MX19 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A5PA8MXJ8 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A23PA8MXZ1 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 J3QT63 122 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 HOXA3O43365 443 aaPredicted RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A15PP0C7V4 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A13PP0C7W8 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A14PP0C7W9 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FAM90A24PP0C7X0 464 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GATA2P23769 480 aaPredicted RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 ERVK11-1P61568 191 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 WIPI1Q5MNZ9 446 aaPredicted RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 C9orf40Q8IXQ3 194 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 PRSS33Q8NF86 280 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF721Q8TF20 911 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 STRADBQ9C0K7 418 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 OR2H1Q9GZK4 316 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 PRNDQ9UKY0 176 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 TCF19Q9Y242 345 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 IGLV3-32A0A0A0MS00 114 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 TMEM189A5PLL7 270 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 FOLR3P41439 243 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 RPL15P61313 204 aaKnown RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 CCL7P80098 99 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 HOXA4Q00056 320 aaPredicted RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 RBPMS2Q6ZRY4 209 aaKnown RBP4.89□□□□□ -1.63
HDAC9-203ENST00000406072 SFTPA2Q8IWL1 248 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF645Q8N7E2 425 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 TRGV10A0A0A0MS01 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 PSMB11A5LHX3 300 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE12JA6NER3 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 G3V4G9 280 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 PEX7O00628 323 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE7O76087 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 IGHV3-48P01763 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE12FP0CL80 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE12GP0CL81 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE12IP0CL82 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 KIR2DS2P43631 304 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 HERV-K104P63124 156 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GAGE4Q13068 117 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 PSMG4Q5JS54 123 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 GUSBP11Q6P575 273 aa4.89□□□□□ -1.63
HDAC9-203ENST00000406072 CPAMD8Q8IZJ3 1885 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms