RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RBM38Q9H0Z9 239 aaKnown RBP11.8□□□□□ -0.52
ATG4B-203ENST00000400772 UBQLN2Q9UHD9 624 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 SCP2D1Q9UJQ7 156 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 V9GYH0 126 aa11.8□□□□□ -0.52
ATG4B-203ENST00000400772 IGHV3-49A0A0A0MS15 119 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 NPBWR1P48145 328 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
ATG4B-203ENST00000400772 SUPT4H1P63272 117 aaKnown RBP11.79□□□□□ -0.52
ATG4B-203ENST00000400772 KLF9Q13886 244 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-203ENST00000400772 ODF3L2Q3SX64 289 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 ZFAND6Q6FIF0 208 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 TRIM63Q969Q1 353 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 GGTLC1Q9BX51 225 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 MCUBQ9NWR8 336 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 CACNG5Q9UF02 275 aa11.79□□□□□ -0.52
ATG4B-203ENST00000400772 LOC102724200A0A096LPH7 203 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-203ENST00000400772 CORTO00230 105 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 ZNF79Q15937 498 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 FAM90A2PQ658T7 463 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 LILRB2Q8N423 598 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
ATG4B-203ENST00000400772 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 A0A1B0GU03 582 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 CCDC160A6NGH7 325 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 CLN5O75503 358 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 APOHP02749 345 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-203ENST00000400772 PYDC2Q56P42 97 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 OR4X1Q8NH49 305 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 TMEM170AQ8WVE7 144 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
ATG4B-203ENST00000400772 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
ATG4B-203ENST00000400772 AKR1C4P17516 323 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 OPRK1P41145 380 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 HTR2BP41595 481 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 ZNF600Q6ZNG1 722 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 OVOL2Q9BRP0 275 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
ATG4B-203ENST00000400772 OR4C46A6NHA9 309 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 NXPH3O95157 252 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 LYZL2Q7Z4W2 148 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 ST8SIA2Q92186 375 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 HEYLQ9NQ87 328 aaPredicted RBP11.75□□□□□ -0.53
ATG4B-203ENST00000400772 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
ATG4B-203ENST00000400772 HYDINQ4G0P3 5121 aa11.75□□□□□ -0.53
ATG4B-203ENST00000400772 A0A0B4J2A0 478 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 CEBPZOSA8MTT3 80 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 IGKV1-17P01599 117 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 SULT1A3P0DMM9 295 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 SULT1A4P0DMN0 295 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 TOMM5Q8N4H5 51 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 GINS3Q9BRX5 216 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 SHPKQ9UHJ6 478 aa11.74□□□□□ -0.53
ATG4B-203ENST00000400772 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 ZNF701M0R085 212 aaPredicted RBP11.73□□□□□ -0.53
ATG4B-203ENST00000400772 S100A5P33763 92 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 TFPI2P48307 235 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 CCR6P51684 374 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 ZNF124Q15973 351 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 TIGITQ495A1 244 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 PRSS54Q6PEW0 395 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 APRG1Q8IVJ8 170 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 GBGT1Q8N5D6 347 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
ATG4B-203ENST00000400772 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 DFFBO76075 338 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 FAUP35544 74 aaKnown RBP11.72□□□□□ -0.53
ATG4B-203ENST00000400772 AP3S2P59780 193 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 TNFRSF9Q07011 255 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 SMCO1Q147U7 214 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 TMED4Q7Z7H5 227 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 LGI3Q8N145 548 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 RNASEH2CQ8TDP1 164 aaKnown RBP11.72□□□□□ -0.53
ATG4B-203ENST00000400772 SRRQ9GZT4 340 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 HSPB7Q9UBY9 170 aa11.72□□□□□ -0.53
ATG4B-203ENST00000400772 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 ANXA3P12429 323 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.53
ATG4B-203ENST00000400772 CRYBB3P26998 211 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 RND2P52198 227 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 APOC4P55056 127 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 TMEM128Q5BJH2 165 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 DEDD2Q8WXF8 326 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 MS4A6AQ9H2W1 248 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 RBKSQ9H477 322 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 CACFD1Q9UGQ2 172 aa11.71□□□□□ -0.53
ATG4B-203ENST00000400772 KIR2DL5BA0A0G2JN68 375 aa11.7□□□□□ -0.54
ATG4B-203ENST00000400772 KIR2DL5BA0A0G2JPC4 375 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 371.5 ms