RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 TAF1LQ8IZX4 1826 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 PARP14Q460N5 1801 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 TMEM250H0YL14 139 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 AICDAQ9GZX7 198 aa11.47□□□□□ -0.57
VAPA-202ENST00000400000 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
VAPA-202ENST00000400000 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.57
VAPA-202ENST00000400000 LYZL4Q96KX0 146 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 A0A1B0GUT8 65 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 NPIPB13A6NJU9 1138 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 PAX2Q02962 417 aa11.46□□□□□ -0.57
VAPA-202ENST00000400000 RTBDNQ9BSG5 229 aaPredicted RBP11.46□□□□□ -0.57
VAPA-202ENST00000400000 CD8AP01732 235 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 FMC1Q96HJ9 113 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 ERVH48-1M5A8F1 160 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 ZNF600Q6ZNG1 722 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 SHISA3A0PJX4 238 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.58
VAPA-202ENST00000400000 SLC25A28Q96A46 364 aa11.46□□□□□ -0.58
VAPA-202ENST00000400000 ZNF98A6NK75 572 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 IL17RELQ6ZVW7 336 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 IL36BQ9NZH7 164 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 TM4SF5O14894 197 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 SLC25A20O43772 301 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 TBX6O95947 436 aaPredicted RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 MYOD1P15172 320 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 MEF2CQ06413 473 aaPredicted RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 CRIM1Q9NZV1 1036 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 AKAP6Q13023 2319 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 PATJQ8NI35 1801 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 ZNF688P0C7X2 276 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 HIST1H2BAQ96A08 127 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 SEPSECSQ9HD40 501 aaKnown RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 THSD7AQ9UPZ6 1657 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 COQ2Q96H96 371 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 CFHR1Q03591 330 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 C1QL4Q86Z23 238 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 PHLDA1Q8WV24 401 aaPredicted RBP11.45□□□□□ -0.58
VAPA-202ENST00000400000 NEUROG1Q92886 237 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 LINC00477Q96M19 166 aa11.45□□□□□ -0.58
VAPA-202ENST00000400000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.44□□□□□ -0.58
VAPA-202ENST00000400000 DDTP30046 118 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 GATD1Q8NB37 220 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 TMEM133Q9H2Q1 129 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 LINC00312Q9Y6C7 94 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 COL5A3P25940 1745 aaPredicted RBP11.44□□□□□ -0.58
VAPA-202ENST00000400000 MPDZO75970 2070 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 C1QTNF9P0C862 333 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 CD59P13987 128 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 ADMP35318 185 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 PRR30Q53SZ7 412 aaPredicted RBP11.44□□□□□ -0.58
VAPA-202ENST00000400000 TRGV1A0A0A0MS02 117 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 HBDP02042 147 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 LINC00205P59089 165 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 IQCF6A8MYZ5 107 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 NCR2O95944 276 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 SDHCQ99643 169 aaPredicted RBP11.44□□□□□ -0.58
VAPA-202ENST00000400000 ALPK2Q86TB3 2170 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 GPX4P36969 197 aaPredicted RBP11.44□□□□□ -0.58
VAPA-202ENST00000400000 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 C1QTNF5Q9BXJ0 243 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 CST9LQ9H4G1 147 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 PSME4Q14997 1843 aa11.44□□□□□ -0.58
VAPA-202ENST00000400000 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 PAX8Q06710 450 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 MORN2Q502X0 79 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 ZNF625Q96I27 306 aaPredicted RBP11.43□□□□□ -0.58
VAPA-202ENST00000400000 S100A7L2Q5SY68 101 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 SLC25A39Q9BZJ4 359 aaPredicted RBP11.43□□□□□ -0.58
VAPA-202ENST00000400000 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
VAPA-202ENST00000400000 WNT2P09544 360 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 C1orf122Q6ZSJ8 110 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 KLHL30-AS1Q8NEE0 82 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 RNF125Q96EQ8 232 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
VAPA-202ENST00000400000 TMEM249Q2WGJ8 235 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 MRAPQ8TCY5 172 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 IGHV1-46P01743 117 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 CD300EQ496F6 205 aaPredicted RBP11.43□□□□□ -0.58
VAPA-202ENST00000400000 C19orf24Q9BVV8 132 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 FCN3O75636 299 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 FOXL1Q12952 345 aa11.43□□□□□ -0.58
VAPA-202ENST00000400000 ZNF672Q499Z4 452 aaPredicted RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 SRSF3P84103 164 aaKnown RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 PAQR4Q8N4S7 273 aaPredicted RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 RUSC1-AS1Q66K80 236 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms