RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 TRGV3P03979 118 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 TPPP2P59282 170 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 RAB11AP62491 216 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 ERHP84090 104 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 ZNF266Q14584 549 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 SPINK9Q5DT21 86 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 HSD17B13Q7Z5P4 300 aaPredicted RBP13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 PHYHIPLQ96FC7 376 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 SRSF8Q9BRL6 282 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
SMIM11A-202ENST00000399295 MEGF8Q7Z7M0 2845 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 TNCP24821 2201 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 CST7O76096 145 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 IFNA10P01566 189 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 METTL15P1P0C7V9 234 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 HTR2BP41595 481 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 RPL27AP46776 148 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 RUNX1Q01196 453 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 OXLD1Q5BKU9 147 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 SAMD5Q5TGI4 173 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 UBAC2Q8NBM4 344 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 OR5C1Q8NGR4 320 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 ST8SIA2Q92186 375 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 GPR61Q9BZJ8 451 aa13.55□□□□□ -0.24
SMIM11A-202ENST00000399295 I3L521 148 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 OR8U8P0C7N1 319 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 IGLL1P15814 213 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 BAP18Q8IXM2 172 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 ZNF680Q8NEM1 530 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 SLC24A4Q8NFF2 622 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 OR11H1Q8NG94 326 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 OR10P1Q8NGE3 313 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 SMIM3Q9BZL3 60 aa13.54□□□□□ -0.24
SMIM11A-202ENST00000399295 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 BRI3O95415 125 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 MYOD1P15172 320 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 NPY1RP25929 384 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 SNCAP37840 140 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 SUB1P53999 127 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 DEFA6Q01524 100 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 KPRPQ5T749 579 aaPredicted RBP13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 OR1N2Q8NGR9 330 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 RCC1LQ96I51 464 aaKnown RBP13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 ATP5SQ99766 215 aa13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
SMIM11A-202ENST00000399295 TEX22C9J3V5 150 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 E7EUB6 86 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 IGHV3-11P01762 117 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 LGALS1P09382 135 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 RPL7L1Q6DKI1 246 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 REC114Q7Z4M0 266 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 LILRB2Q8N423 598 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 TTC9CQ8N5M4 171 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 BSCL2Q96G97 398 aaPredicted RBP13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 GGACTQ9BVM4 153 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 UBQLN2Q9UHD9 624 aa13.52□□□□□ -0.25
SMIM11A-202ENST00000399295 A0A0G2JLM5 398 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 CGB1A6NKQ9 187 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 PMS2P5A8MQ11 134 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 IFNA5P01569 189 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 FHL3Q13643 280 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 CLINT1Q14677 625 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 BEAN1Q3B7T3 259 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 OR8G2PQ6IF36 304 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 SCARB1Q8WTV0 552 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 DPF1Q92782 380 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 ARV1Q9H2C2 271 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 WFDC1Q9HC57 220 aa13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 ZMAT5Q9UDW3 170 aaKnown RBP13.51□□□□□ -0.25
SMIM11A-202ENST00000399295 A0A1B0GW64 132 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 IFNA4P05014 189 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 EXOSC2Q13868 293 aaKnown RBP13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 HAPLN4Q86UW8 402 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 OR10W1Q8NGF6 305 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 TMEM147Q9BVK8 224 aa13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 PARD6GQ9BYG4 376 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-202ENST00000399295 IGLC7A0M8Q6 106 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 CFDP00746 253 aaPredicted RBP13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 PRH1P02810 166 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 DLK1P80370 383 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 WT1-ASQ06250 92 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 ARL16Q0P5N6 197 aa13.49□□□□□ -0.25
SMIM11A-202ENST00000399295 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms