RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ADAMTSL1Q8N6G6 1762 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 LMO7Q8WWI1 1683 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 TRAV5A0A0B4J249 113 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 IZUMO1RA6ND01 250 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 BPY2O14599 106 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 BCL2L11O43521 198 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 PGLYRP1O75594 196 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 IGHV4-34P06331 123 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 LINC00869P0C866 280 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 CD28P10747 220 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 INSL3P51460 131 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 NCS1P62166 190 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 RPS25P62851 125 aaKnown RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 TAF9Q16594 264 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 MRGPRG-AS1Q2M3A8 158 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF678Q5SXM1 525 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 Q5XG85 94 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 DEFB128Q7Z7B8 93 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 H1FOOQ8IZA3 346 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 C15orf56Q8N910 161 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 FER1L6-AS1Q8NA97 138 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 OR4K13Q8NH42 304 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 H1FXQ92522 213 aaKnown RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 RMI2Q96E14 147 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 SLC25A21Q9BQT8 299 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 PRADC1Q9BSG0 188 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 SHANK2-AS3Q9BTD1 123 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 PLA2G12AQ9BZM1 189 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 NKX6-2Q9C056 277 aaPredicted RBP3.42□□□□□ -1.86
GABPB1-204ENST00000396464 EFCAB1Q9HAE3 211 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 OTORQ9NRC9 128 aa3.42□□□□□ -1.86
GABPB1-204ENST00000396464 COL5A2P05997 1499 aaPredicted RBP3.41□□□□□ -1.86
GABPB1-204ENST00000396464 OVOS2A0A0G2JMS6 1433 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 CRB1P82279 1406 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 IGHV3-43A0A0B4J1X8 118 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 KLF18A0A0U1RQI7 1052 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 GABARAPH6UMI1 98 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 I3L521 148 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 TP53I11O14683 189 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF32P17041 273 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 ELK1P19419 428 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 NTF3P20783 257 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 NFYBP25208 207 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 CXCL12P48061 93 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 NUDT2P50583 147 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 EIF3IQ13347 325 aaKnown RBP3.41□□□□□ -1.86
GABPB1-204ENST00000396464 OCIAD2Q56VL3 154 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 GLYATL3Q5SZD4 288 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 SLC25A34Q6PIV7 304 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 LCA10Q71F78 164 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 OR10G2Q8NGC3 310 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 ZNF799Q96GE5 643 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 YIPF3Q9GZM5 350 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 OR5AC2Q9NZP5 309 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 TNFSF18Q9UNG2 199 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 DLG5Q8TDM6 1919 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 KIF13BQ9NQT8 1826 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 DOT1LQ8TEK3 1739 aa3.41□□□□□ -1.86
GABPB1-204ENST00000396464 LRRC37A3O60309 1634 aa3.4□□□□□ -1.86
GABPB1-204ENST00000396464 LRP6O75581 1613 aa3.4□□□□□ -1.86
GABPB1-204ENST00000396464 PCNX3Q9H6A9 2034 aa3.4□□□□□ -1.86
GABPB1-204ENST00000396464 CARMIL3Q8ND23 1372 aa3.4□□□□□ -1.86
GABPB1-204ENST00000396464 LOC107984640A0A0U1RRK4 108 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 FAM92AA1XBS5 289 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 F6UZH7 168 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 H7C423 109 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 J3QQQ9 107 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 UBE2L6O14933 153 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 TRGC2P03986 189 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 S100A8P05109 93 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 CASP1P29466 404 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 TAS2R45P59539 299 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RPL30P62888 115 aaKnown RBP3.4□□□□□ -1.87
GABPB1-204ENST00000396464 PSG7Q13046 419 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RRN3P1Q2M238 152 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 SCIMPQ6UWF3 145 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 NTM-AS1Q6ZSK4 140 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 PDZD9Q8IXQ8 264 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 DAND5Q8N907 189 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RHOXF1Q8NHV9 184 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 CIRBP-AS1Q8TBR5 109 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 ITLN2Q8WWU7 325 aaPredicted RBP3.4□□□□□ -1.87
GABPB1-204ENST00000396464 SLAMF6Q96DU3 332 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 LINC00479Q96M42 142 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 IFI27L2Q9H2X8 130 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RNF122Q9H9V4 155 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 NAT8Q9UHE5 227 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 HS3ST2Q9Y278 367 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RGPD1P0DJD0 1748 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 LOXHD1Q8IVV2 1947 aa3.4□□□□□ -1.87
GABPB1-204ENST00000396464 ZNFX1Q9P2E3 1918 aaKnown RBP3.4□□□□□ -1.87
GABPB1-204ENST00000396464 RALGAPA2Q2PPJ7 1873 aa3.39□□□□□ -1.87
GABPB1-204ENST00000396464 PKD1L3Q7Z443 1732 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms