RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PSPHP1O15172 72 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 OR7C2O60412 319 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 CXCL5P42830 114 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 LMO4P61968 165 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 TBPL1P62380 186 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 KLHDC8BQ8IXV7 354 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 TEX29Q8N6K0 151 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 FER1L6-AS1Q8NA97 138 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 DNAJC30Q96LL9 226 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 SLC17A9Q9BYT1 436 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 WDR61Q9GZS3 305 aaKnown RBP2.74□□□□□ -1.97
XRN1-202ENST00000392981 NAT8Q9UHE5 227 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 M0R381 172 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 MPC2O95563 127 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 Q499Y3 187 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 ZFAND6Q6FIF0 208 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 TRAPPC6BQ86SZ2 158 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 SRSF12Q8WXF0 261 aaKnown RBP2.74□□□□□ -1.97
XRN1-202ENST00000392981 GPR146Q96CH1 333 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 SNRNP25Q9BV90 132 aaKnown RBP2.74□□□□□ -1.97
XRN1-202ENST00000392981 TMEM191AQ9H0A3 160 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 GTSF1LQ9H1H1 148 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 LAMB4A4D0S4 1761 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 ODAMA1E959 279 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 H3BSH0 61 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 OR5G3P0C626 314 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 CECR9P0C854 216 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 NMUP48645 174 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 VAX1Q5SQQ9 334 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 HMGN2P46Q86SG4 172 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 LINC01551Q86U37 167 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 CD177Q8N6Q3 437 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 OR10AG1Q8NH19 301 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 IGFBPL1Q8WX77 278 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 NDFIP1Q9BT67 221 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 GABARAPL1Q9H0R8 117 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 PARLQ9H300 379 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 PSG8Q9UQ74 426 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 FOCADQ5VW36 1801 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 IGHV1-69-2A0A0G2JMI3 117 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 ZFP92A6NM28 416 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 ZNF727A8MUV8 499 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 UMAD1C9J7I0 102 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 C8orf87E5RJ46 101 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 APOC4-APOC2K7ER74 178 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 NPIPB7O75200 414 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 IGHV3-48P01763 117 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 HLA-DQB1P01920 261 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 APOC2P02655 101 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 APODP05090 189 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 NMBP08949 121 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 BRS3P32247 399 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 TIFABQ6ZNK6 161 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 SLC22A24Q8N4F4 322 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 F2RL3Q96RI0 385 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 CELA1Q9UNI1 258 aa2.74□□□□□ -1.97
XRN1-202ENST00000392981 DOCK7Q96N67 2140 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 IGKV1-8A0A0C4DH67 115 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 COLCA2A8K830 154 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 RPL36A-HNRNPH2H7BZ11 118 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 CCL25O15444 150 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 SLC37A4O43826 429 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 C1QCP02747 245 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 POLR2IP36954 125 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 PFN3P60673 137 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 IBA57Q5T440 356 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 CLEC20AQ6ZU45 233 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 C11orf72Q8NBR9 251 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 NMES1Q9C002 83 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 PARP12Q9H0J9 701 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 MRPL27Q9P0M9 148 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 COL12A1Q99715 3063 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 ZNF860A6NHJ4 632 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 PEX7O00628 323 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 ISLRO14498 428 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 IGHG1P01857 330 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 ACVRL1P37023 503 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 ZNF140P52738 457 aaPredicted RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 C10orf91Q5T1B1 145 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 TMEM86AQ8N2M4 240 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 DEFB125Q8N687 156 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 OR11H6Q8NGC7 330 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 OR5D16Q8NGK9 328 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 GGTLC1Q9BX51 225 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 C1QTNF6Q9BXI9 259 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 NEU3Q9UQ49 428 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 COL4A3Q01955 1670 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 A0A1B0GXF2 115 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 WI2-2373I1.2A0A1W2PRP0 233 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 COX7A2LO14548 114 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 PAX4O43316 350 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 TDGF1P13385 188 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 IL3RAP26951 378 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 NANOS2P60321 138 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 FKBP1AP62942 108 aaKnown RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 BSPH1Q075Z2 132 aa2.73□□□□□ -1.97
XRN1-202ENST00000392981 LGALSLQ3ZCW2 172 aaPredicted RBP2.73□□□□□ -1.97
XRN1-202ENST00000392981 GLYATL3Q5SZD4 288 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms