RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 PATE3B3GLJ2 98 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 IFI6P09912 130 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 CLEC7AQ9BXN2 247 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 MRPL20Q9BYC9 149 aaKnown RBP13.52□□□□□ -0.25
SHANK1-204ENST00000391814 RNF182Q8N6D2 247 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 YAE1D1Q9NRH1 226 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 AGMATQ9BSE5 352 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 FAM106AQ4KMX7 169 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 ZNF562Q6V9R5 426 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 FBXL15Q9H469 300 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 FAM90A2PQ658T7 463 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
SHANK1-204ENST00000391814 TRBV6-7A0A0A0MS04 114 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 D6R8Y8 96 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 GAS1P54826 345 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 LINC01551Q86U37 167 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
SHANK1-204ENST00000391814 PLSCR4Q9NRQ2 329 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 A0A0U1RRA0 63 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 H7C1H1 209 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 NCR2O95944 276 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 TFF1P04155 84 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
SHANK1-204ENST00000391814 ITLN2Q8WWU7 325 aaPredicted RBP13.5□□□□□ -0.25
SHANK1-204ENST00000391814 CKAP5Q14008 2032 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 TMPRSS3P57727 454 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
SHANK1-204ENST00000391814 FAM231BA6NCW3 169 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
SHANK1-204ENST00000391814 SYS1-DBNDD2H3BUS1 97 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 DEFB104AQ8WTQ1 72 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 WBP1LQ9NX94 342 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 LAGE3Q14657 143 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 CD5LO43866 347 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 C15orf61A6NNL5 157 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 CDCP2Q5VXM1 449 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 GLMPQ8WWB7 406 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 SUPT4H1P63272 117 aaKnown RBP13.49□□□□□ -0.25
SHANK1-204ENST00000391814 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.49□□□□□ -0.25
SHANK1-204ENST00000391814 PSME4Q14997 1843 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
SHANK1-204ENST00000391814 CENPVQ7Z7K6 275 aaPredicted RBP13.49□□□□□ -0.25
SHANK1-204ENST00000391814 MTCL1Q9Y4B5 1905 aaKnown RBP13.48□□□□□ -0.25
SHANK1-204ENST00000391814 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 A0A1W2PRX2 142 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
SHANK1-204ENST00000391814 ID3Q02535 119 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 CFAP161Q6P656 301 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 TMEM144Q7Z5S9 345 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 PSG8Q9UQ74 426 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 IGLV3-21P80748 117 aaPredicted RBP13.48□□□□□ -0.25
SHANK1-204ENST00000391814 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 OSR1Q8TAX0 266 aaPredicted RBP13.48□□□□□ -0.25
SHANK1-204ENST00000391814 SCRT1Q9BWW7 348 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 COX6A1P12074 109 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 RTN4RL2Q86UN3 420 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 NPIPB13A6NJU9 1138 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 DUX3Q96PT4 197 aa13.48□□□□□ -0.25
SHANK1-204ENST00000391814 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
SHANK1-204ENST00000391814 FBXL7Q9UJT9 491 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 TSSC4Q9Y5U2 329 aaPredicted RBP13.47□□□□□ -0.25
SHANK1-204ENST00000391814 LOC285556D6RIA3 1793 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 SCN2AQ99250 2005 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 IGKV1-9A0A0C4DH69 117 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 TMEM30BQ3MIR4 351 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 CACNG8Q8WXS5 425 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 CLEC19AQ6UXS0 136 aa13.47□□□□□ -0.25
SHANK1-204ENST00000391814 FABP5P3A8MUU1 101 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 LYPD3O95274 346 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 IGKV1D-33P01593 117 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 IGKV1-33P01594 117 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 MALP21145 153 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 ZNF48Q96MX3 618 aaPredicted RBP13.46□□□□□ -0.25
SHANK1-204ENST00000391814 GLI3P10071 1580 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 UPK2O00526 184 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 NKX2-8O15522 239 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 C1QTNF5Q9BXJ0 243 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 ZNF138P52744 262 aa13.46□□□□□ -0.25
SHANK1-204ENST00000391814 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.25
SHANK1-204ENST00000391814 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.25
SHANK1-204ENST00000391814 PRR33A8MZF0 331 aa13.46□□□□□ -0.26
SHANK1-204ENST00000391814 ZNF497Q6ZNH5 498 aa13.46□□□□□ -0.26
SHANK1-204ENST00000391814 ZNF319Q9P2F9 582 aa13.46□□□□□ -0.26
SHANK1-204ENST00000391814 TRAV1-1A0A0B4J248 108 aa13.46□□□□□ -0.26
SHANK1-204ENST00000391814 ZNF837Q96EG3 531 aaPredicted RBP13.46□□□□□ -0.26
SHANK1-204ENST00000391814 MGST2Q99735 147 aa13.46□□□□□ -0.26
SHANK1-204ENST00000391814 ORMDL2Q53FV1 153 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 PATJQ8NI35 1801 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 CD28P10747 220 aa13.45□□□□□ -0.26
SHANK1-204ENST00000391814 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms