RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 HMGN2P46Q86SG4 172 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 PRR15Q8IV56 129 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 HIST3H2BBQ8N257 126 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 SIGLECL1Q8N7X8 197 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 OR5A1Q8NGJ0 315 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 OR8D4Q8NGM9 314 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 PFN4Q8NHR9 129 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 YPEL2Q96QA6 119 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 SCGB3A1Q96QR1 104 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 OR8B2Q96RD0 313 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 GPX7Q96SL4 187 aaPredicted RBP0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 TSC22D3Q99576 134 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 HIGD2AQ9BW72 106 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 KRTAP9-8Q9BYQ0 159 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 PAIP2BQ9ULR5 123 aaKnown RBP0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 MED31Q9Y3C7 131 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 RBM7Q9Y580 266 aaKnown RBP0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 MED1Q15648 1581 aaPredicted RBP0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 MAST2Q6P0Q8 1798 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 ADGRL1O94910 1474 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 NUP205Q92621 2012 aa0.98□□□□□ -2.25
TRAJ39-201ENST00000390498 SCN10AQ9Y5Y9 1956 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 CABIN1Q9Y6J0 2220 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 COL16A1Q07092 1604 aaPredicted RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 ECM29Q5VYK3 1845 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 VIRMAQ69YN4 1812 aaKnown RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 DOCK9Q9BZ29 2069 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TRAV7A0A075B6U4 112 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TRGV10A0A0A0MS01 117 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 MDFIC2A0A1B0GVS7 189 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TMEM189A5PLL7 270 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 K7EM74 188 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 OVOL1O14753 267 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 SLC22A1O15245 554 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 GNRH2O43555 120 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TCL1BO95988 128 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 IGKV1-16P04430 117 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 BPGMP07738 259 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 SCTP09683 121 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 P0DMU3 169 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 FAM231AP0DMU4 169 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 FAM231CP0DMU5 169 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RPS3P23396 243 aaKnown RBP eCLIP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 S100A11P31949 105 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RNASE4P34096 147 aaKnown RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 AKR1C3P42330 323 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RPL28P46779 137 aaKnown RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 EVX1P49640 407 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 INSL3P51460 131 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 CKS1BP61024 79 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 EIF3IQ13347 325 aaKnown RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 SPCS2Q15005 226 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 MORN2Q502X0 79 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 PABPC1L2AQ5JQF8 200 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 C22orf39Q6P5X5 142 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 Q6ZS52 159 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 LHFPL1Q86WI0 220 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 BPIFA4PQ86YQ2 179 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 KRTAP11-1Q8IUC1 163 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 IFT20Q8IY31 132 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RPP25LQ8N5L8 163 aaKnown RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RNF182Q8N6D2 247 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TMEM229BQ8NBD8 167 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 Q8NDZ9 215 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 C1orf64Q8NEQ6 169 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 OR52R1Q8NGF1 315 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 OR4C16Q8NGL9 310 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 PPTC7Q8NI37 304 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 STAG3L4Q8TBR4 150 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 WFDC5Q8TCV5 224 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 DCANP1Q8TF63 244 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 DNAJC9Q8WXX5 260 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 FGF13Q92913 245 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 BORCS8Q96FH0 119 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TEX37Q96LM6 180 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 IMMP2LQ96T52 175 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 HIST1H2BLQ99880 126 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 SLC25A21Q9BQT8 299 aaPredicted RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 GINS4Q9BRT9 223 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 ZNF471Q9BX82 626 aaPredicted RBP0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 YIPF3Q9GZM5 350 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TPT1P8Q9HAU6 139 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 OSTCQ9NRP0 149 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 COPZ2Q9P299 210 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 NAT8Q9UHE5 227 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 EPDR1Q9UM22 224 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TIMM9Q9Y5J7 89 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 R4GN34 69 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 DSCAMO60469 2012 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 PIK3C2AO00443 1686 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 RIC1Q4ADV7 1423 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 TRAPPC8Q9Y2L5 1435 aa0.97□□□□□ -2.25
TRAJ39-201ENST00000390498 NACAE9PAV3 2078 aa0.96□□□□□ -2.25
TRAJ39-201ENST00000390498 MED23Q9ULK4 1368 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 THADAQ6YHU6 1953 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 DENND4CQ5VZ89 1909 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 TRAV5A0A0B4J249 113 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 A0A0D9SG52 128 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 C7orf71A4D174 169 aa0.96□□□□□ -2.26
TRAJ39-201ENST00000390498 LRCOL1A6NCL2 159 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms