RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ATP6V1FQ16864 119 aa9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 C5orf64Q2M2E5 130 aa9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 TMEM249Q2WGJ8 235 aa9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 C2orf88Q9BSF0 95 aa9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 FAM103A1Q9BTL3 118 aaKnown RBP9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 EIF5A2Q9GZV4 153 aaKnown RBP9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 GAR1Q9NY12 217 aaKnown RBP9.71□□□□□ -0.86
SPTBN1-203ENST00000389980 C7orf77A4D0Y5 90 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 CNIH1O95406 144 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 PKIAP61925 76 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 GUK1Q16774 197 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 AKIRIN2Q53H80 203 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 ARSJQ5FYB0 599 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 GNPNAT1Q96EK6 184 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 C14orf144Q96I85 54 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 SEC14L6B5MCN3 397 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 FAM106CPP0CH98 169 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 BRS3P32247 399 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 VWC2Q2TAL6 325 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 C2orf83Q53S99 150 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 P2RX4Q99571 388 aa9.7□□□□□ -0.86
SPTBN1-203ENST00000389980 SONP18583 2426 aaKnown RBP9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 IGHV3-48P01763 117 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 GATA3P23771 443 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 PRSS57Q6UWY2 283 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 TREML4Q6UXN2 200 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 CIARTQ8N365 385 aaPredicted RBP9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 SSMEM1Q8WWF3 244 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 RARRES2Q99969 163 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 SCRT1Q9BWW7 348 aa9.69□□□□□ -0.86
SPTBN1-203ENST00000389980 TSTD3H0UI37 97 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 ELLP55199 621 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 FXYD3Q14802 87 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 C9orf152Q5JTZ5 239 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 AKR1C8PQ5T2L2 129 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 TMEM219Q86XT9 240 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 C22orf15Q8WYQ4 148 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 TMEM68Q96MH6 324 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 MYO9AB2RTY4 2548 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 SH2D7A6NKC9 451 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 INS-IGF2F8WCM5 200 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 MDKP21741 143 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 MFAP2P55001 183 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 DLK1P80370 383 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 NDPQ00604 133 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 AWAT1Q58HT5 328 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 Q8N9W7 124 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 PIFOQ8TCI5 191 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 ABHD5Q8WTS1 349 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 PARD6GQ9BYG4 376 aaPredicted RBP9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
SPTBN1-203ENST00000389980 MDFIC2A0A1B0GVS7 189 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 SMAD7O15105 426 aaKnown RBP9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 TGOLN2O43493 480 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 RAB4AP20338 218 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 CX3CL1P78423 397 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 RAB24Q969Q5 203 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 SSX3Q99909 188 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 IGHV3-21A0A0B4J1V1 117 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 UMAD1C9J7I0 102 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 AKR1C3P42330 323 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 HAGHQ16775 308 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 ACSM6Q6P461 480 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 BCL6BQ8N143 479 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 OR2T6Q8NHC8 308 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 MGST2Q99735 147 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 PSMG3Q9BT73 122 aaPredicted RBP9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
SPTBN1-203ENST00000389980 DEFA4P12838 97 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 GAMTQ14353 236 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 LY6EQ16553 131 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 MISP3Q96FF7 219 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 NEU1Q99519 415 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 HSPB9Q9BQS6 159 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 RPRMQ9NS64 109 aa9.66□□□□□ -0.86
SPTBN1-203ENST00000389980 A0A1B0GV90 55 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 CXorf65A6NEN9 183 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 SCAF4O95104 1147 aaKnown RBP9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 DDTP30046 118 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 OPRK1P41145 380 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 CD69Q07108 199 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 KIAA0141Q14154 515 aaPredicted RBP9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 ZNF562Q6V9R5 426 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 LFNGQ8NES3 379 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 YPEL4Q96NS1 127 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 C20orf24Q9BUV8 137 aa9.65□□□□□ -0.86
SPTBN1-203ENST00000389980 MRPL36Q9P0J6 103 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms