RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 HEYLQ9NQ87 328 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF4-201ENST00000379236 IGKV3-7A0A075B6H7 116 aa18.37■□□□□ 0.53
TNFRSF4-201ENST00000379236 CEBPZOSA8MTT3 80 aa18.37■□□□□ 0.53
TNFRSF4-201ENST00000379236 HTR2BP41595 481 aa18.37■□□□□ 0.53
TNFRSF4-201ENST00000379236 OR52E5Q8NH55 327 aa18.37■□□□□ 0.53
TNFRSF4-201ENST00000379236 IGHV3OR16-13A0A075B7E8 117 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 IGHV3-74A0A0B4J1X5 117 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 RPS10-NUDT3A0A1W2PQS6 291 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 TFPI2P48307 235 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 PAFAH1B2P68402 229 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 TOMM20LQ6UXN7 152 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 Q6ZRM9 215 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 CACFD1Q9UGQ2 172 aa18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 PUS1Q9Y606 427 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNFRSF4-201ENST00000379236 STARD9Q9P2P6 4700 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 CSMD3Q7Z407 3707 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 TMEM50AO95807 157 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 ANXA3P12429 323 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 AKR1C4P17516 323 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 S100A5P33763 92 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 CMC4P56277 68 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 ODF3L2Q3SX64 289 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 PYDC2Q56P42 97 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 GPR146Q96CH1 333 aa18.35■□□□□ 0.53
TNFRSF4-201ENST00000379236 CLN5O75503 358 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 CD5P06127 495 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 AP3S2P59780 193 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 PVRIGQ6DKI7 326 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 IL22RA2Q969J5 263 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 TMEM231Q9H6L2 316 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 TMEM56-RWDD3S4R434 201 aa18.34■□□□□ 0.53
TNFRSF4-201ENST00000379236 SULT1A3P0DMM9 295 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 SULT1A4P0DMN0 295 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 RPL11P62913 178 aaKnown RBP18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 AARDQ4LEZ3 155 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 TCF24Q7RTU0 167 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 GBGT1Q8N5D6 347 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 STPG3Q8N7X2 389 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 TMEM230Q96A57 120 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 GALNT14Q96FL9 552 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 ZNF414Q96IQ9 312 aa18.33■□□□□ 0.52
TNFRSF4-201ENST00000379236 UBE2CO00762 179 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 NXPH3O95157 252 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 SRPXP78539 464 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 TMEM187Q14656 261 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 BSXQ3C1V8 233 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 TOMM5Q8N4H5 51 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 SLC24A4Q8NFF2 622 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 OR4X1Q8NH49 305 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 NARS2Q96I59 477 aaKnown RBP18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 SOSTQ9BQB4 213 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 OVOL2Q9BRP0 275 aa18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 FNDC4Q9H6D8 234 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF4-201ENST00000379236 TRAV30A0A087WSZ9 112 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 DNASE2O00115 360 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 RPL35AP18077 110 aaKnown RBP18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 NOXA1Q86UR1 476 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 ST8SIA2Q92186 375 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 METTL26Q96S19 204 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 ZFAND3Q9H8U3 227 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 PRR13Q9NZ81 148 aa18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 DYNC2H1Q8NCM8 4307 aaKnown RBP18.31■□□□□ 0.52
TNFRSF4-201ENST00000379236 PIGBOS1A0A0B4J2F0 54 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 IGHV3-66A0A0C4DH42 116 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 A0A1W2PS18 150 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 NPPCP23582 126 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 MLANAQ16655 118 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 WFDC3Q8IUB2 231 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 APRG1Q8IVJ8 170 aa18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 RNASEH2CQ8TDP1 164 aaKnown RBP18.3■□□□□ 0.52
TNFRSF4-201ENST00000379236 TENM2Q9NT68 2774 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 KIR2DL5BA0A0G2JN68 375 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 KIR2DL5BA0A0G2JPC4 375 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 SPRY2O43597 315 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 SLC25A4P12235 298 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 DEFB135Q30KP9 77 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 C2orf83Q53S99 150 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 ETFRF1Q6IPR1 90 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 Q6ZWC4 215 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 TMED4Q7Z7H5 227 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 KIR2DL5AQ8N109 375 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 LGI3Q8N145 548 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 KIR2DL5BQ8NHK3 375 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 VSIRQ9H7M9 311 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 MRPL36Q9P0J6 103 aaKnown RBP18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 TP53TG1Q9Y2A0 90 aa18.29■□□□□ 0.52
TNFRSF4-201ENST00000379236 LYSTQ99698 3801 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 A0A0B4J2A0 478 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 LCE6AA0A183 80 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 A0A1B0GU03 582 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 APOHP02749 345 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 NPY1RP25929 384 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 CCR6P51684 374 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 SMCO1Q147U7 214 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 FAM90A2PQ658T7 463 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 SHPKQ9UHJ6 478 aa18.28■□□□□ 0.52
TNFRSF4-201ENST00000379236 DFFBO76075 338 aa18.27■□□□□ 0.52
TNFRSF4-201ENST00000379236 IFNA10P01566 189 aa18.27■□□□□ 0.52
TNFRSF4-201ENST00000379236 KLF9Q13886 244 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF4-201ENST00000379236 TIGITQ495A1 244 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms