RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MFAP2P55001 183 aa11.89□□□□□ -0.51
TCOF1-202ENST00000377797 ZNF253O75346 499 aa11.89□□□□□ -0.51
TCOF1-202ENST00000377797 NBEAP1P0C6P0 100 aa11.89□□□□□ -0.51
TCOF1-202ENST00000377797 ZNF137PP52743 207 aa11.89□□□□□ -0.51
TCOF1-202ENST00000377797 TREML4Q6UXN2 200 aa11.89□□□□□ -0.51
TCOF1-202ENST00000377797 ATP5G3P48201 142 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 C5orf17Q8NAS9 161 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 TRGV3P03979 118 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 FCER1GP30273 86 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 BPESC1Q9GZL8 116 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 A0A087X0M5 115 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 A0A1B0GX30 115 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 PCP4P48539 62 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 PRSS8Q16651 343 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 EEF1AKMT3Q96AZ1 226 aa11.88□□□□□ -0.51
TCOF1-202ENST00000377797 IGHV3OR16-8A0A075B7F1 116 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 RNASEKQ6P5S7 137 aaKnown RBP11.87□□□□□ -0.51
TCOF1-202ENST00000377797 FA2HQ7L5A8 372 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 TRAV40A0A0B4J280 105 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 SMAD7O15105 426 aaKnown RBP11.87□□□□□ -0.51
TCOF1-202ENST00000377797 TRGC2P03986 189 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM155Q4W5P6 130 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 OR4C5Q8NGB2 326 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 A8MWL6 223 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 AGAP20933 346 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 GPR183P32249 361 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 EFNB3Q15768 340 aa11.87□□□□□ -0.51
TCOF1-202ENST00000377797 BUB1B-PAK6H3BSN5 160 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM50AO95807 157 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 ICAM4Q14773 271 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 C16orf92Q96LL3 132 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 IGKV1-39P01597 117 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 IGKV1D-39P04432 117 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 NPPCP23582 126 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 RPP25LQ8N5L8 163 aaKnown RBP11.86□□□□□ -0.51
TCOF1-202ENST00000377797 GGTLC1Q9BX51 225 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 A0A1W2PS18 150 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 TFPI2P48307 235 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 NCOR1P1Q9H4R4 102 aa11.86□□□□□ -0.51
TCOF1-202ENST00000377797 J3QR89 54 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 TCAPO15273 167 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 MMP23AO75900 390 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-202ENST00000377797 AMTP48728 403 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM183BQ1AE95 376 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 ZNF343Q6P1L6 599 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 TEX29Q8N6K0 151 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 PRSS3P2Q8NHM4 247 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 MBD3L1Q8WWY6 194 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 DMRTA2Q96SC8 542 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 SCO2A0A1W2PP80 73 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 CGB1A6NKQ9 187 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 CSN3P07498 182 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 DLX1P56177 255 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 GTF2H5Q6ZYL4 71 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 C5orf42Q9H799 3197 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 RIGQ13278 110 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 Q8NA96 180 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 HIST1H2BAQ96A08 127 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 ARFGEF3Q5TH69 2177 aa11.85□□□□□ -0.51
TCOF1-202ENST00000377797 M0R1W7 72 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 PAFAH1B2P68402 229 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 SPRNQ5BIV9 151 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 TRAV34A0A0B4J273 112 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-202ENST00000377797 PACRGQ96M98 296 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-202ENST00000377797 SHISA9B4DS77 424 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 VENTXO95231 258 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 DLX6P56179 175 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 FAM106AQ4KMX7 169 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 PRTN3P24158 256 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 TDGF1P3P51864 188 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 ZNF134P52741 427 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
TCOF1-202ENST00000377797 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 M0R143 59 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
TCOF1-202ENST00000377797 AMY1AP04745 511 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 UQCRFS1P47985 274 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 RAB9AP51151 201 aa11.83□□□□□ -0.52
TCOF1-202ENST00000377797 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms