RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RNF183Q96D59 192 aa5.51□□□□□ -1.53
UBR4-204ENST00000375254 CGB1A6NKQ9 187 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 OR13A1Q8NGR1 328 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 SP7Q8TDD2 431 aaPredicted RBP5.5□□□□□ -1.53
UBR4-204ENST00000375254 ZGRF1Q86YA3 2104 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 TRGV5A0A0B4J1U4 118 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 KLHDC9Q8NEP7 349 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 ZNF747Q9BV97 191 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 U3KQE9 123 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 VN1R4Q7Z5H5 301 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 LINC00477Q96M19 166 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 NAA38Q9BRA0 125 aaKnown RBP5.5□□□□□ -1.53
UBR4-204ENST00000375254 BMPERQ8N8U9 685 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 LINC00114Q6XXX2 140 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 METRNQ9UJH8 293 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 TM4SF4P48230 202 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 DEFB119Q8N690 84 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 RASL10AQ92737 203 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 LINC00158P58513 81 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 DTX2Q86UW9 622 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 TEX45Q8NA69 505 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 FAM110AQ9BQ89 295 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 CDK2AP2O75956 126 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 REPIN1Q9BWE0 567 aaKnown RBP5.5□□□□□ -1.53
UBR4-204ENST00000375254 FOXC1Q12948 553 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 FGF22Q9HCT0 170 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 ABCA6Q8N139 1617 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 JMJD8Q96S16 334 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 TRAV40A0A0B4J280 105 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 SAP30O75446 220 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 CELA3AP09093 270 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 Q8N8P6 123 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 CCL17Q92583 94 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 DIP2CQ9Y2E4 1556 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 WNT2P09544 360 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 GATD1Q8NB37 220 aa5.5□□□□□ -1.53
UBR4-204ENST00000375254 ABCA4P78363 2273 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TCRBV4S1A1TA0A5B7 111 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 Q8NFD4 153 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 PHF7Q9BWX1 381 aaPredicted RBP5.49□□□□□ -1.53
UBR4-204ENST00000375254 RNF186Q9NXI6 227 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 A0A0J9YW62 118 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TRBV10-2A0A0K0K1G8 114 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 SUPT4H1P63272 117 aaKnown RBP5.49□□□□□ -1.53
UBR4-204ENST00000375254 HLA-DRB4P13762 266 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 HLA-DRB4X5D2U9 266 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 PSG4Q00888 419 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 FOXA2Q9Y261 457 aaPredicted RBP5.49□□□□□ -1.53
UBR4-204ENST00000375254 COL2A1P02458 1487 aaPredicted RBP5.49□□□□□ -1.53
UBR4-204ENST00000375254 HGFACQ04756 655 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 HCP5Q6MZN7 132 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 C1orf122Q6ZSJ8 110 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CT55Q8WUE5 264 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 VOPP1Q96AW1 172 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CALYQ9NYX4 217 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CRIM1Q9NZV1 1036 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CASZ1Q86V15 1759 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CADP27708 2225 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 WFDC3Q8IUB2 231 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 EEF1AKMT3Q96AZ1 226 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TRAV17A0A0B4J275 112 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TREML4Q6UXN2 200 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TMEM54Q969K7 222 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 NRTNQ99748 197 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 CD55P08174 381 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 SH2D6Q7Z4S9 175 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 TMEM52Q8NDY8 209 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 PILRAQ9UKJ1 303 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 LOC102723996A0A087X1L8 192 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 LHFPL6Q9Y693 200 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 IGHV3-64DA0A0J9YX35 117 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 NEURL4Q96JN8 1562 aa5.49□□□□□ -1.53
UBR4-204ENST00000375254 IGHV3-20A0A0C4DH32 117 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 EGR4Q05215 589 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 CD69Q07108 199 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 LINC01555Q8NAE3 123 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 EGR2P11161 476 aaPredicted RBP5.48□□□□□ -1.53
UBR4-204ENST00000375254 ZIC4Q8N9L1 334 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 LIME1Q9H400 295 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 TRGV8A0A0C4DH27 118 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 A0A087WX48 190 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 PAX4O43316 350 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 SCRT2Q9NQ03 307 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 ANXA2RQ3ZCQ2 193 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 C16orf54Q6UWD8 224 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 C8orf31Q8N9H6 132 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 LINC00479Q96M42 142 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 V9GYV3 84 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 IGHV3-43A0A0B4J1X8 118 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 IGHV3-43DP0DP04 118 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 Q6ZUT4 128 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 ADGBQ8N7X0 1667 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 HOXD3P31249 432 aaPredicted RBP5.48□□□□□ -1.53
UBR4-204ENST00000375254 H3BT86 120 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 TFF3Q07654 80 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 C11orf52Q96A22 123 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 CCDC88CQ9P219 2028 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 M0R381 172 aa5.48□□□□□ -1.53
UBR4-204ENST00000375254 MLST8Q9BVC4 326 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms