RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 HLA-DRB4P13762 266 aa11□□□□□ -0.65
TRAPPC3-203ENST00000373163 BTF3P20290 206 aaKnown RBP11□□□□□ -0.65
TRAPPC3-203ENST00000373163 FXYD7P58549 80 aa11□□□□□ -0.65
TRAPPC3-203ENST00000373163 TSC22D3Q99576 134 aa11□□□□□ -0.65
TRAPPC3-203ENST00000373163 HLA-DRB4X5D2U9 266 aa11□□□□□ -0.65
TRAPPC3-203ENST00000373163 MYCBP2O75592 4640 aa11□□□□□ -0.65
TRAPPC3-203ENST00000373163 TRAV1-2A0A0B4J238 106 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 LOC102723971A0A1B0GUV8 181 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 RPS10-NUDT3A0A1W2PQS6 291 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 FAM90A26D6RGX4 464 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 CASQ2O14958 399 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 NUDT3O95989 172 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 HBE1P02100 147 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 GNRHRP30968 328 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 AP2S1P53680 142 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 XGP55808 180 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
TRAPPC3-203ENST00000373163 J3QL48 77 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 IGKV3-20P01619 116 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 RAB3BP20337 219 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 ERHP84090 104 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 PRCDQ00LT1 54 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 MLLT11Q13015 90 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 BORCS5Q969J3 196 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 TMEM230Q96A57 120 aa10.98□□□□□ -0.65
TRAPPC3-203ENST00000373163 PGLYRP1O75594 196 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 SCGNO76038 276 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 MYL9P24844 172 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 HOXA1P49639 335 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 HERV-K104P61576 105 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 TTC32Q5I0X7 151 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 HOGA1Q86XE5 327 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 PACRGLQ8N7B6 248 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 KRTAP1-5Q9BYS1 174 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 SEPSECSQ9HD40 501 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 PTTG2Q9NZH5 202 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 GOLT1BQ9Y3E0 138 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 FAT1Q14517 4588 aa10.97□□□□□ -0.65
TRAPPC3-203ENST00000373163 FCER2P06734 321 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 DLK1P80370 383 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 C16orf54Q6UWD8 224 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 OR4A16Q8NH70 328 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 LGALS14Q8TCE9 139 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 C7orf50Q9BRJ6 194 aaKnown RBP10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 Q9H8V8 135 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 U3KQE9 123 aa10.96□□□□□ -0.65
TRAPPC3-203ENST00000373163 CLN5O75503 358 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 SCGB2A1O75556 95 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 SSX7Q7RTT5 188 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 ZNF709Q8N972 641 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 NRN1Q9NPD7 142 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 DAPK2Q9UIK4 370 aa10.95□□□□□ -0.66
TRAPPC3-203ENST00000373163 SMIM30A4D0T7 59 aa10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 HSPE1P61604 102 aaKnown RBP10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 CLINT1Q14677 625 aa10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 SPINK9Q5DT21 86 aa10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 C1orf158Q8N1D5 194 aa10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 MGLLQ99685 303 aa10.94□□□□□ -0.66
TRAPPC3-203ENST00000373163 F5H768 121 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 CORTO00230 105 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 HNRNPCP07910 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 SNCAP37840 140 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 DEFB1P60022 68 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 TIGITQ495A1 244 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 H2BFWTQ7Z2G1 175 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 CMTM1Q8IZ96 169 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 OR4X1Q8NH49 305 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 SLC35B3Q9H1N7 401 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 Q9H3A6 140 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 PGPEP1Q9NXJ5 209 aa10.93□□□□□ -0.66
TRAPPC3-203ENST00000373163 IGKV1-17P01599 117 aa10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 FUSP35637 526 aaKnown RBP eCLIP10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 OPRK1P41145 380 aa10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC3-203ENST00000373163 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 FOXI2Q6ZQN5 318 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 RNF141Q8WVD5 230 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 SEC22AQ96IW7 307 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 MAGT1Q9H0U3 335 aa10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 FNDC4Q9H6D8 234 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC3-203ENST00000373163 TRAV18A0A075B6X5 111 aa10.9□□□□□ -0.66
TRAPPC3-203ENST00000373163 A0A1W2PPQ1 181 aa10.9□□□□□ -0.66
TRAPPC3-203ENST00000373163 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
TRAPPC3-203ENST00000373163 SMR3BP02814 79 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms