RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ECM29Q5VYK3 1845 aa0.5□□□□□ -2.33
RNU4-1-201ENST00000363925 TOPBP1Q92547 1522 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 TGIF2-C20orf24A0A0A6YYL0 155 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 OR2B3O76000 313 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 CD79AP11912 226 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 COX6A1P12074 109 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 S100A4P26447 101 aaKnown RBP0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 RAB5BP61020 215 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 PDE6HQ13956 83 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 TRAPPC6BQ86SZ2 158 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 CLECL1Q8IZS7 167 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 TERB2Q8NHR7 220 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 SLC35B4Q969S0 331 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 GPR146Q96CH1 333 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 OSTCQ9NRP0 149 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 SLC35A3Q9Y2D2 325 aa0.49□□□□□ -2.33
RNU4-1-201ENST00000363925 C9orf84Q5VXU9 1444 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 KCNK1O00180 336 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 TGOLN2O43493 480 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 OR5G3P0C626 314 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 MIFP14174 115 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 PSME3P61289 254 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 C20orf196Q8IYI0 205 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 Q8N6K4 173 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 PPP1R2P1Q96PQ5 205 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 C6orf62Q9GZU0 229 aaPredicted RBP0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 MIXL1Q9H2W2 232 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 COL4A5P29400 1685 aa0.48□□□□□ -2.33
RNU4-1-201ENST00000363925 EXOC1LA0A1B0GW35 172 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 FAAHO00519 579 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 CETN3O15182 167 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 SNRPD2P62316 118 aaKnown RBP0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 CNBPP62633 177 aaKnown RBP0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 MPV17LQ2QL34 196 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 ALKAL1Q6UXT8 129 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 KRTAP19-3Q7Z4W3 81 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 GKN2Q86XP6 184 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 KRT222Q8N1A0 295 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 C4orf3Q8WVX3 66 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 NIPSNAP1Q9BPW8 284 aa0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 LLPHQ9BRT6 129 aaKnown RBP0.47□□□□□ -2.33
RNU4-1-201ENST00000363925 CASP8AP2Q9UKL3 1982 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 AHNAK2Q8IVF2 5795 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 TAF1LQ8IZX4 1826 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 TRAV12-1A0A0B4J245 112 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 ZNF736B4DX44 427 aaPredicted RBP0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 BUB1B-PAK6H3BSN5 160 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 RPL5P46777 297 aaKnown RBP0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 RPS20P60866 119 aaKnown RBP0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 RHOBP62745 196 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 COTL1Q14019 142 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 C1orf137Q5JT78 98 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 FAM74A1Q5RGS3 127 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 CCDC122Q5T0U0 273 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 SPATA8Q6RVD6 105 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 DDI1Q8WTU0 396 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 PTH2Q96A98 100 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 DCUN1D1Q96GG9 259 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 OR52E6Q96RD3 313 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 OR51V1Q9H2C8 321 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 TMEM56-RWDD3S4R434 201 aa0.46□□□□□ -2.34
RNU4-1-201ENST00000363925 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 OR2T8A6NH00 312 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 M0R2N4 97 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 PIRO00625 290 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 INE1O15225 51 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 LYZL6O75951 148 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 DEFB113Q30KQ7 82 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 SOSTDC1Q6X4U4 206 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 C3orf56Q8N813 242 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 LINC00301Q8NCQ3 95 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 CCDC90BQ9GZT6 254 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 NHP2Q9NX24 153 aaKnown RBP0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 EPDR1Q9UM22 224 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 GUCA1BQ9UMX6 200 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 MCM3APO60318 1980 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 SCN10AQ9Y5Y9 1956 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 MTUS2Q5JR59 1369 aa0.45□□□□□ -2.34
RNU4-1-201ENST00000363925 CNTRLQ7Z7A1 2325 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 PEAK1Q9H792 1746 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 A0A1W2PPM0 123 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 C1orf196B1AJZ1 125 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 HIST1H1TP22492 207 aaPredicted RBP0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 CDC42P60953 191 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 HIST3H3Q16695 136 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 BRMS1LQ5PSV4 323 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 TMEM86BQ8N661 226 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 OR52R1Q8NGF1 315 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 OR13D1Q8NGV5 346 aa0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 UTP11Q9Y3A2 253 aaKnown RBP0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 HEATR1Q9H583 2144 aaKnown RBP0.44□□□□□ -2.34
RNU4-1-201ENST00000363925 E9PCH4 1651 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 MYH10P35580 1976 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 PLXND1Q9Y4D7 1925 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 HIST1H1EP10412 219 aaKnown RBP0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 SULT1A1P50225 295 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 YPEL3P61236 119 aaPredicted RBP0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 SPRNQ5BIV9 151 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 CDKL4Q5MAI5 379 aa0.43□□□□□ -2.34
RNU4-1-201ENST00000363925 OR10J5Q8NHC4 309 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms