RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TIMD4Q96H15 378 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 PRELID3AQ96N28 172 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 PATE3B3GLJ2 98 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 NTF4P34130 210 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 CHCHD1Q96BP2 118 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 A0A087X0K7 114 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 MUC21A0A0G2JKD1 596 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 MUC21A0A140T8X8 626 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 A6NJY4 79 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 FOXG1P55316 489 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 TRIP6Q15654 476 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 MUC21Q5SSG8 566 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 FOXL2NBQ6ZUU3 175 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 ZNF114Q8NC26 417 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 MS4A6AQ9H2W1 248 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 CST9LQ9H4G1 147 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 FOXI3A8MTJ6 420 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 KLK10O43240 276 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 CCL8P80075 99 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 PEAR1Q5VY43 1037 aaPredicted RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 OR9G1Q8NH87 305 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 DNASE2BQ8WZ79 361 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 HERVK_113P61574 105 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 PPP1R32Q7Z5V6 425 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 OR4C13Q8NGP0 309 aa13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 INTS1Q8N201 2190 aaKnown RBP13.28□□□□□ -0.28
CLSTN1-201ENST00000361311 MC5RP33032 325 aa13.27□□□□□ -0.28
CLSTN1-201ENST00000361311 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.28
CLSTN1-201ENST00000361311 BMI1P35226 326 aa13.27□□□□□ -0.28
CLSTN1-201ENST00000361311 C21orf140B9A014 251 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 PSPNO60542 156 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 MBNL2Q5VZF2 373 aaKnown RBP13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 ONECUT1Q9UBC0 465 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 IGKV1-39P01597 117 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 IGKV1D-39P04432 117 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 OR5A1Q8NGJ0 315 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 ZNF502Q8TBZ5 544 aa13.27□□□□□ -0.29
CLSTN1-201ENST00000361311 MORN2Q502X0 79 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 ATP5L2Q7Z4Y8 100 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 MTURNQ8N3F0 131 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 SAP25Q8TEE9 199 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 A0A1B0GWB2 263 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 CELA3BP08861 270 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 C2orf83Q53S99 150 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 RASL11AQ6T310 242 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 NOTCH4Q99466 2003 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 FAM90A9PA6NNJ1 464 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 SMAGPQ0VAQ4 97 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 RSPO1Q2MKA7 263 aaPredicted RBP13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
CLSTN1-201ENST00000361311 M0QZ24 198 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 SPANXN1Q5VSR9 72 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 FMC1Q96HJ9 113 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 POLEQ07864 2286 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 TRAV5A0A0B4J249 113 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 F5H697 171 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 YPEL1O60688 119 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 LINC00205P59089 165 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 OR4X2Q8NGF9 303 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 YPEL2Q96QA6 119 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 SYS1-DBNDD2H3BUS1 97 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 SIGMAR1Q99720 223 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 LOC102723996A0A087X1L8 192 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 PDLIM4P50479 330 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 TTC9CQ8N5M4 171 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 NUP35Q8NFH5 326 aa13.25□□□□□ -0.29
CLSTN1-201ENST00000361311 LINC00473A8K010 186 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 IQCF6A8MYZ5 107 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 CD69Q07108 199 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 TMEM160Q9NX00 188 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 COL4A3Q01955 1670 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 CD5LO43866 347 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 RPL15P61313 204 aaKnown RBP13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 C18orf32Q8TCD1 76 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 GGNQ86UU5 652 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 DOCK10Q96BY6 2186 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 UPK2O00526 184 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 Q6P435 159 aa13.24□□□□□ -0.29
CLSTN1-201ENST00000361311 GFRA3O60609 400 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 CACNG7P62955 275 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 PRSS8Q16651 343 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 TDRG1Q3Y452 100 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 Q9H3A6 140 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 NHP2Q9NX24 153 aaKnown RBP13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 NUPR1O60356 82 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 C17orf82Q86X59 251 aaPredicted RBP13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 ORMDL3Q8N138 153 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 NBASA2RRP1 2371 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms