RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-201ENST00000360565 FAM53AQ6NSI3 398 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-201ENST00000360565 LYPD6Q86Y78 171 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 CDC42EP3Q9UKI2 254 aa13.5□□□□□ -0.25
SCAF1-201ENST00000360565 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 PAX9P55771 341 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 FAM90A2PQ658T7 463 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 RNASE6Q93091 150 aaKnown RBP13.49□□□□□ -0.25
SCAF1-201ENST00000360565 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 C15orf62A8K5M9 175 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 LOXL3P58215 753 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 TMEM97Q5BJF2 176 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 FAM208BQ5VWN6 2430 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 ACACBO00763 2458 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 IGHV3OR16-8A0A075B7F1 116 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 TIMP3P35625 211 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 LEMD1Q68G75 181 aa13.49□□□□□ -0.25
SCAF1-201ENST00000360565 ADMP35318 185 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 GNG5P63218 68 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 OBSL1O75147 1896 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 MGST2Q99735 147 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 TMEM133Q9H2Q1 129 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 ZNF106Q9H2Y7 1883 aaKnown RBP13.48□□□□□ -0.25
SCAF1-201ENST00000360565 PF4V1P10720 104 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 CD24P25063 80 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 AGMATQ9BSE5 352 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 GFRA3O60609 400 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 IGHV3-23P01764 117 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 MGPP08493 103 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 RNF138Q8WVD3 245 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 C16orf92Q96LL3 132 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 GPR82Q96P67 336 aa13.48□□□□□ -0.25
SCAF1-201ENST00000360565 TCF21O43680 179 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 NMUP48645 174 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 PPP1R27Q86WC6 154 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 METTL26Q96S19 204 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 HIGD1CA8MV81 97 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 HTN1P15515 57 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 TRAV9-1A0A075B6T8 112 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 TRAV5A0A0B4J249 113 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 J3QR89 54 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 CTAG1AP78358 180 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 RELQ04864 619 aaPredicted RBP13.47□□□□□ -0.25
SCAF1-201ENST00000360565 ZNF474Q6S9Z5 364 aaPredicted RBP13.47□□□□□ -0.25
SCAF1-201ENST00000360565 GTF2H5Q6ZYL4 71 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 WDR86Q86TI4 376 aa13.47□□□□□ -0.25
SCAF1-201ENST00000360565 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 CA1P00915 261 aaPredicted RBP13.46□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV1-39P01597 117 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 IGKV1D-39P04432 117 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 JOSD1Q15040 202 aaPredicted RBP13.46□□□□□ -0.25
SCAF1-201ENST00000360565 DKK1O94907 266 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 AMBPP02760 352 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 C21orf62-AS1Q17RA5 79 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 PYY3Q5JQD4 70 aa13.46□□□□□ -0.25
SCAF1-201ENST00000360565 IGHV3-49A0A0A0MS15 119 aa13.46□□□□□ -0.26
SCAF1-201ENST00000360565 Q9H3A6 140 aa13.46□□□□□ -0.26
SCAF1-201ENST00000360565 FOXI3A8MTJ6 420 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-201ENST00000360565 OSTCQ9NRP0 149 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 AP5S1Q9NUS5 200 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 ZNF257Q9Y2Q1 563 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 TCRBV4S1A1TA0A5B7 111 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MBD3L4A6NDZ8 208 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MBD3L3A6NE82 208 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MBD3L5A6NJ08 208 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-201ENST00000360565 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MBD3L2Q8NHZ7 208 aaPredicted RBP13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MYOZ3Q8TDC0 251 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 ZFP30Q9Y2G7 519 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 IGHV3OR16-10A0A075B7F0 116 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MUC21A0A0G2JKD1 596 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MUC21A0A140T8X8 626 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 MUC21Q5SSG8 566 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 TEX45Q8NA69 505 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 DPF1Q92782 380 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 KLRB1Q12918 225 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 CLEC2AQ6UVW9 174 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 C21orf62Q9NYP8 219 aa13.45□□□□□ -0.26
SCAF1-201ENST00000360565 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 PSG9Q00887 426 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 ZNF738Q8NE65 137 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 SSBP4Q9BWG4 385 aaPredicted RBP13.44□□□□□ -0.26
SCAF1-201ENST00000360565 PTPRQQ9UMZ3 2332 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 SFTPCP11686 197 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 TCF24Q7RTU0 167 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 LHFPL4Q7Z7J7 247 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 FOXH1O75593 365 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 BTF3P20290 206 aaKnown RBP13.44□□□□□ -0.26
SCAF1-201ENST00000360565 SLC25A34Q6PIV7 304 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms