RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GNG7O60262 68 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 YIF1AO95070 293 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 TMEM50AO95807 157 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 HOXA1P49639 335 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 SUPT4H1P63272 117 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 TMEM187Q14656 261 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 TMEM116Q8NCL8 245 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 ST8SIA2Q92186 375 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 TRIM63Q969Q1 353 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 TXN2Q99757 166 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 CACNG5Q9UF02 275 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 V9GYH0 126 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 LCE6AA0A183 80 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 TFPI2P48307 235 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 ZNF846Q147U1 533 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 SURF2Q15527 256 aaPredicted RBP12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 ZNF79Q15937 498 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 MCFD2Q8NI22 146 aa12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 RBPMSQ93062 196 aaKnown RBP12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDLIM7-201ENST00000355572 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 RELQ04864 619 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 RRNAD1Q96FB5 475 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 TMEM56-RWDD3S4R434 201 aa12.36□□□□□ -0.43
PDLIM7-201ENST00000355572 IGKV1-17P01599 117 aa12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 SNCAP37840 140 aa12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
PDLIM7-201ENST00000355572 TRAV14DV4A0A0A6YYC5 116 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 SPCS3P61009 180 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 TIGITQ495A1 244 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 LAMTOR1Q6IAA8 161 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 DUSP18Q8NEJ0 188 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 PRRT1Q99946 306 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 PDCD10Q9BUL8 212 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 MAP6D1Q9H9H5 199 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 DNAH1Q9P2D7 4330 aa12.34□□□□□ -0.43
PDLIM7-201ENST00000355572 CLN5O75503 358 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 B3GALNT1O75752 331 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 DFFBO76075 338 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 ATG12O94817 140 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 S100A5P33763 92 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 OPRK1P41145 380 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 DHODHQ02127 395 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 FAM219AQ8IW50 185 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 GALNT14Q96FL9 552 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 PLECQ15149 4684 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-201ENST00000355572 OR4C46A6NHA9 309 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 AKR1C4P17516 323 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 NPBWR1P48145 328 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 PRSS54Q6PEW0 395 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 WFDC3Q8IUB2 231 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 OR4X1Q8NH49 305 aa12.32□□□□□ -0.44
PDLIM7-201ENST00000355572 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 IGLC1P0CG04 106 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 C2orf83Q53S99 150 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 CCDC190Q86UF4 302 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
PDLIM7-201ENST00000355572 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 CORTO00230 105 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 RND2P52198 227 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 RBMS2Q15434 407 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 SLC24A4Q8NFF2 622 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 ALMS1Q8TCU4 4167 aa12.3□□□□□ -0.44
PDLIM7-201ENST00000355572 SPRY2O43597 315 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 HTR2BP41595 481 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 SUB1P53999 127 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 IL17DQ8TAD2 202 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 IL22RA2Q969J5 263 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 RNF183Q96D59 192 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 GINS3Q9BRX5 216 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 RBKSQ9H477 322 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 SCP2D1Q9UJQ7 156 aa12.29□□□□□ -0.44
PDLIM7-201ENST00000355572 A0A0B4J2A0 478 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 SULT1A3P0DMM9 295 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 SULT1A4P0DMN0 295 aa12.28□□□□□ -0.44
PDLIM7-201ENST00000355572 CRYBB3P26998 211 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms