RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 GAMTQ14353 236 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 RNF152Q8N8N0 203 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 SCARB1Q8WTV0 552 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 MRPL36Q9P0J6 103 aaKnown RBP21.07■□□□□ 0.96
SSBP4-202ENST00000348495 IGHV3-21A0A0B4J1V1 117 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 FAM223BA6NKX1 122 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 IGHV3-48P01763 117 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 RAB9AP51151 201 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 C15orf32Q32M92 178 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 FAM223AQ8IWN6 122 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 UQCC1Q9NVA1 299 aa21.07■□□□□ 0.96
SSBP4-202ENST00000348495 MFSD2BA6NFX1 497 aa21.06■□□□□ 0.96
SSBP4-202ENST00000348495 DFFBO76075 338 aa21.06■□□□□ 0.96
SSBP4-202ENST00000348495 ELANEP08246 267 aa21.06■□□□□ 0.96
SSBP4-202ENST00000348495 KLHDC1Q8N7A1 406 aa21.06■□□□□ 0.96
SSBP4-202ENST00000348495 VN1R17PQ8TDU5 208 aa21.06■□□□□ 0.96
SSBP4-202ENST00000348495 KANTRA0A1W2PQU2 76 aa21.05■□□□□ 0.96
SSBP4-202ENST00000348495 TPPP2P59282 170 aa21.05■□□□□ 0.96
SSBP4-202ENST00000348495 OPCMLQ14982 345 aa21.05■□□□□ 0.96
SSBP4-202ENST00000348495 LCNL1Q6ZST4 164 aa21.05■□□□□ 0.96
SSBP4-202ENST00000348495 TMEM116Q8NCL8 245 aa21.05■□□□□ 0.96
SSBP4-202ENST00000348495 MDKP21741 143 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-202ENST00000348495 COMMD1Q8N668 190 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 MYOZ3Q8TDC0 251 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 CLPSL1A2RUU4 121 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 KIAA0141Q14154 515 aaPredicted RBP21.04■□□□□ 0.96
SSBP4-202ENST00000348495 RPL7L1Q6DKI1 246 aaKnown RBP21.04■□□□□ 0.96
SSBP4-202ENST00000348495 TREML4Q6UXN2 200 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 USMG5Q96IX5 58 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 SLC35E1Q96K37 410 aa21.04■□□□□ 0.96
SSBP4-202ENST00000348495 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.03■□□□□ 0.96
SSBP4-202ENST00000348495 OR5AU1Q8NGC0 362 aa21.03■□□□□ 0.96
SSBP4-202ENST00000348495 OR4X1Q8NH49 305 aa21.03■□□□□ 0.96
SSBP4-202ENST00000348495 CXorf58Q96LI9 332 aa21.03■□□□□ 0.96
SSBP4-202ENST00000348495 NPVFQ9HCQ7 196 aa21.03■□□□□ 0.96
SSBP4-202ENST00000348495 SETD2Q9BYW2 2564 aaPredicted RBP21.02■□□□□ 0.96
SSBP4-202ENST00000348495 C4BPBP20851 252 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 PROK1P58294 105 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 ATP5G2Q06055 141 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 ZNF266Q14584 549 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 TMEM144Q7Z5S9 345 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 PRIMA1Q86XR5 153 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 C21orf62Q9NYP8 219 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 WDR83OSQ9Y284 106 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 LSM4Q9Y4Z0 139 aaKnown RBP21.02■□□□□ 0.96
SSBP4-202ENST00000348495 RNF114Q9Y508 228 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 S4R3C0 116 aa21.02■□□□□ 0.96
SSBP4-202ENST00000348495 UBE2L5PA0A1B0GUS4 154 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 F8W735 103 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-202ENST00000348495 FCGR2BP31994 310 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-202ENST00000348495 RND2P52198 227 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 TCTEX1D4Q5JR98 221 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 UBAC2Q8NBM4 344 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 ZNF502Q8TBZ5 544 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 NPIPB3Q92617 1050 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 ACY3Q96HD9 319 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 PARD6GQ9BYG4 376 aaPredicted RBP21.01■□□□□ 0.95
SSBP4-202ENST00000348495 IGKV1OR2-108A0A075B7D4 117 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 SMCO3A2RU48 225 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 RPLP1P05386 114 aaKnown RBP21.01■□□□□ 0.95
SSBP4-202ENST00000348495 AKR1C1Q04828 323 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 ACSM6Q6P461 480 aa21.01■□□□□ 0.95
SSBP4-202ENST00000348495 JTBO76095 146 aa21■□□□□ 0.95
SSBP4-202ENST00000348495 CCDC140Q96MF4 163 aa21■□□□□ 0.95
SSBP4-202ENST00000348495 WDR61Q9GZS3 305 aaKnown RBP21■□□□□ 0.95
SSBP4-202ENST00000348495 A0A0G2JLM5 398 aa20.99■□□□□ 0.95
SSBP4-202ENST00000348495 MFAP4P55083 255 aa20.99■□□□□ 0.95
SSBP4-202ENST00000348495 EEF1AKMT3Q96AZ1 226 aa20.99■□□□□ 0.95
SSBP4-202ENST00000348495 TXN2Q99757 166 aa20.99■□□□□ 0.95
SSBP4-202ENST00000348495 ZNF471Q9BX82 626 aaPredicted RBP20.99■□□□□ 0.95
SSBP4-202ENST00000348495 ARV1Q9H2C2 271 aa20.99■□□□□ 0.95
SSBP4-202ENST00000348495 BORCS7-ASMTA0A0B4J1R7 106 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 IFNA5P01569 189 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 ZNF491Q8N8L2 437 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 THAP8Q8NA92 274 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 TRBV7-1A0A0A6YYK4 115 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 A0A1B0GUS0 222 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 CLN5O75503 358 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 IGHV3-23P01764 117 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 TEPPQ6URK8 271 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 SLC51BQ86UW2 128 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 STOML3Q8TAV4 291 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 ATP6V0BQ99437 205 aa20.98■□□□□ 0.95
SSBP4-202ENST00000348495 IGKV1D-37A0A075B6S9 117 aa20.97■□□□□ 0.95
SSBP4-202ENST00000348495 NPBWR1P48145 328 aa20.97■□□□□ 0.95
SSBP4-202ENST00000348495 BTNL8Q6UX41 500 aa20.97■□□□□ 0.95
SSBP4-202ENST00000348495 OR4X2Q8NGF9 303 aa20.97■□□□□ 0.95
SSBP4-202ENST00000348495 FGF7P21781 194 aa20.96■□□□□ 0.95
SSBP4-202ENST00000348495 UBE2E2Q96LR5 201 aa20.96■□□□□ 0.95
SSBP4-202ENST00000348495 MGST2Q99735 147 aa20.96■□□□□ 0.95
SSBP4-202ENST00000348495 IGLC1P0CG04 106 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 ZNF343Q6P1L6 599 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 HAX1O00165 279 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 MPDU1O75352 247 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 Q56UQ5 140 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 SCGB1C1Q8TD33 95 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 GINS3Q9BRX5 216 aa20.95■□□□□ 0.94
SSBP4-202ENST00000348495 IGHV3-11P01762 117 aa20.94■□□□□ 0.94
SSBP4-202ENST00000348495 FOXL1Q12952 345 aa20.94■□□□□ 0.94
SSBP4-202ENST00000348495 NPCDR1Q9BY65 106 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms