RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 TEX45Q8NA69 505 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 KLF13Q9Y2Y9 288 aaPredicted RBP12.54□□□□□ -0.4
LMNA-201ENST00000347559 LOXL2Q9Y4K0 774 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 AHCTF1Q8WYP5 2266 aa12.54□□□□□ -0.4
LMNA-201ENST00000347559 CCL4P13236 92 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
LMNA-201ENST00000347559 RPL24P83731 157 aaKnown RBP12.53□□□□□ -0.4
LMNA-201ENST00000347559 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 SLC25A33Q9BSK2 321 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 C15orf61A6NNL5 157 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 PLAUP00749 431 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 IGKV3D-15A0A087WSY6 115 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 FAM162BQ5T6X4 162 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 C2orf91Q6ZV80 131 aa12.53□□□□□ -0.4
LMNA-201ENST00000347559 PEX7O00628 323 aa12.52□□□□□ -0.4
LMNA-201ENST00000347559 TBC1D28Q2M2D7 210 aa12.52□□□□□ -0.4
LMNA-201ENST00000347559 FZR1Q9UM11 496 aa12.52□□□□□ -0.4
LMNA-201ENST00000347559 DYSFO75923 2080 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 LIPFP07098 398 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 ZNF134P52741 427 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 ZNF766Q5HY98 468 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 VWA1Q6PCB0 445 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.41
LMNA-201ENST00000347559 ARFGEF3Q5TH69 2177 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 FOLR3P41439 243 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 CYB561P49447 251 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 PLP1P60201 277 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 UTF1Q5T230 341 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 OR2K2Q8NGT1 345 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 H1FXQ92522 213 aaKnown RBP12.51□□□□□ -0.41
LMNA-201ENST00000347559 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
LMNA-201ENST00000347559 TMUB1Q9BVT8 246 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 SVILO95425 2214 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 TRGV8A0A0C4DH27 118 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 FAM90A9PA6NNJ1 464 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 CHEK1O14757 476 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 SRFP11831 508 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 PET117Q6UWS5 81 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 OR10AG1Q8NH19 301 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 HES7Q9BYE0 225 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 GTSF1LQ9H1H1 148 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 OR51B2Q9Y5P1 312 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 ADH4P08319 380 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 COX8AP10176 69 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 RBPJQ06330 500 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 Q0VFX4 171 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
LMNA-201ENST00000347559 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 OR4A5Q8NH83 315 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 BLNKQ8WV28 456 aa12.51□□□□□ -0.41
LMNA-201ENST00000347559 CACNA1EQ15878 2313 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 KLK10O43240 276 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 OR5AL1P0C617 328 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 MPV17P39210 176 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 REG1BP48304 166 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 SEC11AP67812 179 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 A0A0G2JLM5 398 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 A0A1B0GXF2 115 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
LMNA-201ENST00000347559 C9orf118A6NHY6 69 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 LGALS7P47929 136 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 TMEM108Q6UXF1 575 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 LRRC29Q8WV35 223 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 PAXXQ9BUH6 204 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 C1RLQ9NZP8 487 aa12.5□□□□□ -0.41
LMNA-201ENST00000347559 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 C15orf65H3BRN8 121 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 SMAGPQ0VAQ4 97 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 TNFRSF14Q92956 283 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 HSPB8Q9UJY1 196 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 K7EP34 96 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 SLC25A5P05141 298 aaKnown RBP12.49□□□□□ -0.41
LMNA-201ENST00000347559 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 PERPQ96FX8 193 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 ABI3Q9P2A4 366 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 RABAC1Q9UI14 185 aa12.49□□□□□ -0.41
LMNA-201ENST00000347559 A6NDN8 102 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 NCR2O95944 276 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 MAGEA5P43359 124 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 LINC00322Q6ZN03 302 aaPredicted RBP12.48□□□□□ -0.41
LMNA-201ENST00000347559 ATP5L2Q7Z4Y8 100 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 FAM167A-AS1Q96KT0 104 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 SPCS1Q9Y6A9 102 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 SP9P0CG40 484 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 MEF2CQ06413 473 aaPredicted RBP12.48□□□□□ -0.41
LMNA-201ENST00000347559 H3BTX0 84 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 C11orf53Q8IXP5 236 aa12.48□□□□□ -0.41
LMNA-201ENST00000347559 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms