RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 LMO7DNF2Z398 122 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 SERGEFQ9UGK8 458 aa11.52□□□□□ -0.57
TRIO-202ENST00000344204 CDX4O14627 284 aaPredicted RBP11.52□□□□□ -0.57
TRIO-202ENST00000344204 LOXL3P58215 753 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 LINC00305Q7Z4B0 112 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 YAE1D1Q9NRH1 226 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 CD55P08174 381 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 TMEM78Q5T7P6 136 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
TRIO-202ENST00000344204 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 LY96Q9Y6Y9 160 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 SLC25A10Q9UBX3 287 aaPredicted RBP11.51□□□□□ -0.57
TRIO-202ENST00000344204 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 EIF4EBP2Q13542 120 aaPredicted RBP11.51□□□□□ -0.57
TRIO-202ENST00000344204 PCSK4Q6UW60 755 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 MBNL3Q9NUK0 354 aaKnown RBP11.51□□□□□ -0.57
TRIO-202ENST00000344204 PLNP26678 52 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 TMEM101Q96IK0 257 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 SYT8Q8NBV8 401 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
TRIO-202ENST00000344204 Q8NFD4 153 aa11.51□□□□□ -0.57
TRIO-202ENST00000344204 IGHV3-21A0A0B4J1V1 117 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 J3KRW8 73 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 OR2H2O95918 312 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 GPR82Q96P67 336 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 CX3CL1P78423 397 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 FGF11Q92914 225 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 VSIRQ9H7M9 311 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 IGFBP2P18065 325 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 C6orf15Q6UXA7 325 aaPredicted RBP11.5□□□□□ -0.57
TRIO-202ENST00000344204 LILRA1O75019 489 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 PEBP1P30086 187 aaKnown RBP11.5□□□□□ -0.57
TRIO-202ENST00000344204 MIR17HGQ75NE6 70 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
TRIO-202ENST00000344204 ZNF83P51522 516 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 C19orf54Q5BKX5 351 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 SMIM20Q8N5G0 67 aa11.5□□□□□ -0.57
TRIO-202ENST00000344204 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
TRIO-202ENST00000344204 MLNRO43193 412 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 SYNGR3O43761 229 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 MEIG1Q5JSS6 88 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 SPANXDQ9BXN6 97 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 SLC25A48Q6ZT89 311 aaKnown RBP11.49□□□□□ -0.57
TRIO-202ENST00000344204 DEFB127Q9H1M4 99 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 DLL3Q9NYJ7 618 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 INO80CQ6PI98 192 aaPredicted RBP11.49□□□□□ -0.57
TRIO-202ENST00000344204 TUSC5Q8IXB3 177 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 ZNF721Q8TF20 911 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 B5MCH6 92 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 PPBPP02775 128 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 GFRA1P56159 465 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 SLAQ13239 276 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 ATXN8Q156A1 80 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 ID3Q02535 119 aa11.49□□□□□ -0.57
TRIO-202ENST00000344204 H3BTX0 84 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 MOSP00540 346 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 C3AR1Q16581 482 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 WIPI1Q5MNZ9 446 aaPredicted RBP11.48□□□□□ -0.57
TRIO-202ENST00000344204 ELSPBP1Q96BH3 223 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 PRR32B1ATL7 298 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 FCN3O75636 299 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 PRDX2P32119 198 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.48□□□□□ -0.57
TRIO-202ENST00000344204 SIGLEC12Q96PQ1 595 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 RPRMLQ8N4K4 120 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 ABHD12Q8N2K0 398 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 IGHV3OR15-7A0A075B7D8 119 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 KLHDC3Q9BQ90 382 aa11.48□□□□□ -0.57
TRIO-202ENST00000344204 MRPS18CQ9Y3D5 142 aaKnown RBP11.48□□□□□ -0.57
TRIO-202ENST00000344204 TNFAIP6P98066 277 aaPredicted RBP11.47□□□□□ -0.57
TRIO-202ENST00000344204 BMPERQ8N8U9 685 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 ZNF56Q15929 161 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 HCP5Q6MZN7 132 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 CHAC1Q9BUX1 264 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 SPANXCQ9NY87 97 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 PFN1P07737 140 aaKnown RBP11.47□□□□□ -0.57
TRIO-202ENST00000344204 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 LGALS7P47929 136 aa11.47□□□□□ -0.57
TRIO-202ENST00000344204 TMPRSS2O15393 492 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 FAM157AC9JC47 383 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 SSPNQ14714 243 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 ZNF441Q8N8Z8 693 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 ERG28Q9UKR5 140 aa11.46□□□□□ -0.57
TRIO-202ENST00000344204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.58
TRIO-202ENST00000344204 NUP35Q8NFH5 326 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms