RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 IGHV1-69P01742 117 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 PFN1P07737 140 aaKnown RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 CEACAM3P40198 252 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 PAX9P55771 341 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 NUTF2P61970 127 aaKnown RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 RELBQ01201 579 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 USF2Q15853 346 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 IQCJQ1A5X6 159 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM241Q24JQ0 296 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM41BQ5BJD5 291 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 OR4C13Q8NGP0 309 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 OSR1Q8TAX0 266 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 ANAPC16Q96DE5 110 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 MISP3Q96FF7 219 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 ZFHX3Q15911 3703 aa11.77□□□□□ -0.52
CXCL12-201ENST00000343575 TET2Q6N021 2002 aaPredicted RBP11.77□□□□□ -0.52
CXCL12-201ENST00000343575 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.52
CXCL12-201ENST00000343575 LGALS4P56470 323 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 AARDQ4LEZ3 155 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 TMEM170AQ8WVE7 144 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 RPRMQ9NS64 109 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 TIMM9Q9Y5J7 89 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 RFNGQ9Y644 331 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 MYO9AB2RTY4 2548 aa11.77□□□□□ -0.53
CXCL12-201ENST00000343575 FLNAP21333 2647 aaKnown RBP11.76□□□□□ -0.53
CXCL12-201ENST00000343575 ZFP92A6NM28 416 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 KBTBD11O94819 623 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 VENTXO95231 258 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 SAA1P0DJI8 122 aaPredicted RBP11.76□□□□□ -0.53
CXCL12-201ENST00000343575 BTF3P20290 206 aaKnown RBP11.76□□□□□ -0.53
CXCL12-201ENST00000343575 CD24P25063 80 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 CNTFRP26992 372 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 ZNF664Q8N3J9 261 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 HARBI1Q96MB7 349 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 PLXNB1O43157 2135 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 XKRY2A2RUG3 117 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 OOSP1A8MZH6 123 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 H7BYZ3 331 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 HRASP01112 189 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 TYMSP04818 313 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 CD1BP29016 333 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
CXCL12-201ENST00000343575 RPS16P62249 146 aaKnown RBP11.76□□□□□ -0.53
CXCL12-201ENST00000343575 SMIM7Q9BQ49 75 aa11.76□□□□□ -0.53
CXCL12-201ENST00000343575 CEBPZOSA8MTT3 80 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 J3QLI3 93 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 ERVK-16P61578 105 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 LRRC75BQ2VPJ9 315 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 TMEM68Q96MH6 324 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
CXCL12-201ENST00000343575 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
CXCL12-201ENST00000343575 HSPB7Q9UBY9 170 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 ACANP16112 2415 aa11.75□□□□□ -0.53
CXCL12-201ENST00000343575 M0QZK8 103 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MBP02144 154 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 CRYGBP07316 175 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MYOD1P15172 320 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 CYB5R2Q6BCY4 276 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MANBALQ9NQG1 85 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 TPSG1Q9NRR2 321 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 BET1LQ9NYM9 111 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 A0A0U1RQK1 487 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 UPK2O00526 184 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 FSHBP01225 129 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 GALR1P47211 349 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 LGALS7P47929 136 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 PSMB3P49720 205 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MEF2BQ02080 365 aaPredicted RBP11.74□□□□□ -0.53
CXCL12-201ENST00000343575 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 EBI3Q14213 229 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 LCN15Q6UWW0 184 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 TLN2Q9Y4G6 2542 aa11.74□□□□□ -0.53
CXCL12-201ENST00000343575 C15orf61A6NNL5 157 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 FAM90A26D6RGX4 464 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
CXCL12-201ENST00000343575 SYNGR2O43760 224 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 IGKV1D-33P01593 117 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 IGKV1-33P01594 117 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 ADIRFQ15847 76 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 Q8N6K4 173 aa11.73□□□□□ -0.53
CXCL12-201ENST00000343575 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms