RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 HIST1H2BCP62807 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST2H2BEQ16778 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.91□□□□□ -0.02
HOXA9-201ENST00000343483 SPATA31B1PQ5VZV4 182 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HCP5Q6MZN7 132 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 SLC16A13Q7RTY0 426 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 VMO1Q7Z5L0 202 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 NANPQ8TBE9 248 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 IGFBPL1Q8WX77 278 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BHQ93079 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 OR5B12Q96R08 314 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BNQ99877 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HIST1H2BMQ99879 126 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 SEPSECSQ9HD40 501 aaKnown RBP14.91□□□□□ -0.02
HOXA9-201ENST00000343483 IGKV1OR2-108A0A075B7D4 117 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 CLN5O75503 358 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 NDUFB4O95168 129 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 APELAP0DMC3 54 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 HOXA5P20719 270 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 GALR1P47211 349 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PRR20EP86478 221 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PRR20CP86479 221 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PRR20DP86480 221 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PRR20BP86481 221 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PRR20AP86496 221 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 PPP1R27Q86WC6 154 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 OR5T1Q8NG75 326 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 ANAPC16Q96DE5 110 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 ACY3Q96HD9 319 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 FBXL15Q9H469 300 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 ARHGAP32A7KAX9 2087 aa14.91□□□□□ -0.02
HOXA9-201ENST00000343483 ODF3BA8MYP8 253 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 OVOL3O00110 214 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 PFN1P07737 140 aaKnown RBP14.9□□□□□ -0.02
HOXA9-201ENST00000343483 S100PP25815 95 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 GCHFRP30047 84 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 RPL27AP46776 148 aaKnown RBP14.9□□□□□ -0.02
HOXA9-201ENST00000343483 PLGLAQ15195 96 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 OR2T6Q8NHC8 308 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 SLC35E1Q96K37 410 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 TXNDC17Q9BRA2 123 aa14.9□□□□□ -0.02
HOXA9-201ENST00000343483 OR10J1P30954 320 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 COMPP49747 757 aaPredicted RBP14.89□□□□□ -0.03
HOXA9-201ENST00000343483 KIR3DL3Q8N743 410 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 CACNG8Q8WXS5 425 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 SLC45A2Q9UMX9 530 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 IGLC7A0M8Q6 106 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 LINC00869P0C866 280 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 GPX4P36969 197 aaPredicted RBP14.89□□□□□ -0.03
HOXA9-201ENST00000343483 C1orf122Q6ZSJ8 110 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 MRPL41Q8IXM3 137 aaKnown RBP14.89□□□□□ -0.03
HOXA9-201ENST00000343483 RNASEH2CQ8TDP1 164 aaKnown RBP14.89□□□□□ -0.03
HOXA9-201ENST00000343483 FRZBQ92765 325 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 DERL1Q9BUN8 251 aa14.89□□□□□ -0.03
HOXA9-201ENST00000343483 IGHV3-48P01763 117 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 IGHV4-39P01824 125 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 TRGC1P0CF51 173 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 AREGP15514 252 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 CD24P25063 80 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 MMDQ15546 238 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 YTHDF2Q9Y5A9 579 aaKnown RBP14.88□□□□□ -0.03
HOXA9-201ENST00000343483 FOXH1O75593 365 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 MT-CO2P00403 227 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 GATA2P23769 480 aaPredicted RBP14.88□□□□□ -0.03
HOXA9-201ENST00000343483 CDX1P47902 265 aaPredicted RBP14.88□□□□□ -0.03
HOXA9-201ENST00000343483 SSX2Q16385 188 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 LINC01551Q86U37 167 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 RNF5Q99942 180 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 PYGO2Q9BRQ0 406 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 ELOVL1Q9BW60 279 aa14.88□□□□□ -0.03
HOXA9-201ENST00000343483 FNDC4Q9H6D8 234 aaPredicted RBP14.88□□□□□ -0.03
HOXA9-201ENST00000343483 AKAP6Q13023 2319 aa14.87□□□□□ -0.03
HOXA9-201ENST00000343483 HOXB4P17483 251 aaPredicted RBP14.87□□□□□ -0.03
HOXA9-201ENST00000343483 FAM78BQ5VT40 261 aa14.87□□□□□ -0.03
HOXA9-201ENST00000343483 CFHR4Q92496 578 aa14.87□□□□□ -0.03
HOXA9-201ENST00000343483 CSMD2Q7Z408 3487 aa14.87□□□□□ -0.03
HOXA9-201ENST00000343483 SCO2A0A1W2PP80 73 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 FCN1O00602 326 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 C19orf35Q6ZS72 473 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 MIR17HGQ75NE6 70 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 CCL19Q99731 98 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 SRD5A3Q9H8P0 318 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 AURKAIP1Q9NWT8 199 aaPredicted RBP14.86□□□□□ -0.03
HOXA9-201ENST00000343483 IGHV2-70DA0A0C4DH43 119 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 LMO4P61968 165 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 HES1Q14469 280 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 CLEC12BQ2HXU8 276 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 MISP3Q96FF7 219 aa14.86□□□□□ -0.03
HOXA9-201ENST00000343483 PHOX2AO14813 284 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 LGALS4P56470 323 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 PAX2Q02962 417 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 NPIPB3Q92617 1050 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 SIRPDQ9H106 197 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 FUT9Q9Y231 359 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 A0A1W2PPQ1 181 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 IFITM10A6NMD0 228 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 TOX4O94842 621 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 MOSP00540 346 aa14.85□□□□□ -0.03
HOXA9-201ENST00000343483 SRP14P37108 136 aaKnown RBP14.85□□□□□ -0.03
HOXA9-201ENST00000343483 SSBP2P81877 361 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms