RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FAM3BP58499 235 aaPredicted RBP11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 MLANAQ16655 118 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 LGALS14Q8TCE9 139 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 U3KQE9 123 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 TRAV18A0A075B6X5 111 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 TRDV1A0A1B0GX56 115 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 MEIS3P1A6NDR6 274 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 IGKV1-39P01597 117 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 IGKV3-20P01619 116 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 IGKV1D-39P04432 117 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 NUTF2P61970 127 aaKnown RBP11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 OGFRL1Q5TC84 451 aaPredicted RBP11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 GLMPQ8WWB7 406 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 RFNGQ9Y644 331 aa11.5□□□□□ -0.57
NECTIN1-202ENST00000340882 UBR4Q5T4S7 5183 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 SMIM9A6NGZ8 99 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 HERV-K104P61576 105 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 OXA1LQ15070 435 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 C16orf54Q6UWD8 224 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 OR5AP2Q8NGF4 316 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 SEC22AQ96IW7 307 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 ATG101Q9BSB4 218 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 RHBDL2Q9NX52 303 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 DAPK2Q9UIK4 370 aa11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 YTHDF2Q9Y5A9 579 aaKnown RBP11.49□□□□□ -0.57
NECTIN1-202ENST00000340882 NOTOA8MTQ0 251 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 HLA-DRB4P13762 266 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 RFX2P48378 723 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 IZUMO4Q1ZYL8 232 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 TIGITQ495A1 244 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 OR5H6Q8NGV6 325 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 SLC25A38Q96DW6 304 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 TSC22D3Q99576 134 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 FXYD6Q9H0Q3 95 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 NDUFB11Q9NX14 153 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 TPRKBQ9Y3C4 175 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 HLA-DRB4X5D2U9 266 aa11.48□□□□□ -0.57
NECTIN1-202ENST00000340882 CLN5O75503 358 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 SCGNO76038 276 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 KCTD21Q4G0X4 260 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 DHRS11Q6UWP2 260 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 PRSS48Q7RTY5 328 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 C1orf158Q8N1D5 194 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 ZNF709Q8N972 641 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 OR4A16Q8NH70 328 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 TMEM230Q96A57 120 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 ZNF2Q9BSG1 426 aaPredicted RBP11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 KRTAP1-5Q9BYS1 174 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
NECTIN1-202ENST00000340882 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
NECTIN1-202ENST00000340882 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
NECTIN1-202ENST00000340882 GSG1LQ6UXU4 331 aa11.46□□□□□ -0.57
NECTIN1-202ENST00000340882 AUNIPQ9H7T9 357 aa11.46□□□□□ -0.57
NECTIN1-202ENST00000340882 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
NECTIN1-202ENST00000340882 LOC102723971A0A1B0GUV8 181 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 RNASE2P10153 161 aaKnown RBP11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 DAD1P61803 113 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 PHLDA2Q53GA4 152 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 BORCS5Q969J3 196 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 RRP15Q9Y3B9 282 aaKnown RBP11.45□□□□□ -0.58
NECTIN1-202ENST00000340882 GPR31O00270 319 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 PRM2P04554 102 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 XGP55808 180 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 SNRPD3P62318 126 aaKnown RBP11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 SFXN4Q6P4A7 337 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 OR4X1Q8NH49 305 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 MRGPRFQ96AM1 343 aa11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
NECTIN1-202ENST00000340882 PMP2P02689 132 aa11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 SNCAP37840 140 aa11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 TBCEQ15813 527 aaPredicted RBP11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 USF2Q15853 346 aaPredicted RBP11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 TXNL4BQ9NX01 149 aaKnown RBP11.43□□□□□ -0.58
NECTIN1-202ENST00000340882 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 NUDT3O95989 172 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 CLEC2LP0C7M8 214 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 NKX2-1P43699 371 aaPredicted RBP11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 AP2S1P53680 142 aaPredicted RBP11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 Q5VSD8 79 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 TBC1D26Q86UD7 250 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 CMTM1Q8IZ96 169 aa11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 SEPSECSQ9HD40 501 aaKnown RBP11.42□□□□□ -0.58
NECTIN1-202ENST00000340882 HBE1P02100 147 aa11.41□□□□□ -0.58
NECTIN1-202ENST00000340882 OPRK1P41145 380 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms